update range to 10000 bp
locus tag: FAM19471-i1-1.1_000278 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R10223 tRNA(adenine34) aminohydrolase; tRNA adenine + H2O <=> tRNA hypoxanthine + Ammonia
Gene Product
 nucleoside deaminase
Ortholog
 N0.HOG0001282 nucleoside deaminase
KEGG gene
 K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043412 macromolecule modification
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0034470 ncRNA processing
Gene Ontology
 GO:0016553 base conversion or substitution editing
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009451 RNA modification
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008033 tRNA processing
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006400 tRNA modification
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006396 RNA processing
Gene Ontology
 GO:0006382 adenosine to inosine editing
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0002100 tRNA wobble adenosine to inosine editing
Gene Ontology
 GO:0002097 tRNA wobble base modification
Eggnog Protein
 EP:tadA
Eggnog Ortholog
 EO:COG0590
Eggnog Description
 ED:Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
EC Number
 EC:3.5.4.33 tRNA(adenine34) deaminase; tRNA:A34 deaminase; tadA protein; ADAT2-ADAT3 complex; TADA; tRNA adenosine deaminase arginine; AtTadA; tadA/ecADAT2; tRNA A:34 deaminase

Sequences

Nucleotide sequence (GC-content: 50.1 %):

ATGGAAGAAAAAATAACGGAGCGTGGTTATATGAAGGAGGCCTTCAAGGAGGCTAACCAAGCGGCCTTGCTGGGCGAAGTTCCAATTGGGGCGGTCGTCGTTTATAAGGGGAAAATTATCGGACGAGGACACAACATGCGGGAAAAATTCCAAGATGCCACCTACCACGCTGAAGTATTAGCAATCATGGAGGCCTGCCAAGCGTTGGGTTCGTGGCGACTAGAAGAATGTGATCTTTACGTCACCCTTGAACCGTGCATCATGTGTTCTGGGGCGATCATCAATTCACGGATTAAACGAGTCTTTTTTGCGACCCCGGATGAAAAGGCGGGGGCGGTATCCTCCCTTTACCACCTATTAGAAGATACCCGCTTGAACCACCAAGTTGAAGTTCACCAGGGCCTAATGCAAGAAGAAGCCAGTCAAATGCTCAAGGAGTTCTTTCGGGCGATCCGTAAGCGGCAAAAGACGGCGAAGAAAAAACGGCGCCAGGAAGAAAATGCGGCTCAAAAGGCTGGTCAGTGA

Protein sequence:

MEEKITERGYMKEAFKEANQAALLGEVPIGAVVVYKGKIIGRGHNMREKFQDATYHAEVLAIMEACQALGSWRLEECDLYVTLEPCIMCSGAIINSRIKRVFFATPDEKAGAVSSLYHLLEDTRLNHQVEVHQGLMQEEASQMLKEFFRAIRKRQKTAKKKRRQEENAAQKAGQ

GenBank Info

locus_tag - FAM19471-i1-1.1_000278
inference - COORDINATES: similar to AA sequence:RefSeq:WP_004562759.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - nucleoside deaminase
protein_id - extdb:FAM19471-i1-1.1_000278

Gene Locus

Located on scaffold FAM19471-i1-1_scf3

FAM19471-i1-1.1_000277
FAM19471-i1-1.1_000279