update range to 10000 bp
locus tag: FAM19471-i1-1.1_000299 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 vitamin B12 independent methionine synthase
KEGG reaction
 R09365 5-methyltetrahydropteroyltri-L-glutamate:L-selenohomocysteine Se-methyltransferase; Selenohomocysteine + 5-Methyltetrahydropteroyltri-L-glutamate <=> L-Selenomethionine + Tetrahydropteroyltri-L-glutamate kornec00450kornec01100
KEGG reaction
 R04405 5-Methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase; 5-Methyltetrahydropteroyltri-L-glutamate + L-Homocysteine <=> Tetrahydropteroyltri-L-glutamate + L-Methionine kornec00270kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0003148 vitamin B12 independent methionine synthase
KEGG gene
 K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] kornec00270kornec00450kornec01100kornec01110kornec01230
Eggnog Protein
 EP:metE
Eggnog Ortholog
 EO:COG0620
Eggnog Description
 ED:methionine synthase
EC Number
 EC:2.1.1.14 5-methyltetrahydropteroyltriglutamate---homocysteine S-methyltransferase; tetrahydropteroyltriglutamate methyltransferase; homocysteine methylase; methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase; methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase; cobalamin-independent methionine synthase; methionine synthase (cobalamin-independent); MetE kornec00270kornec00450kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00270 Cysteine and methionine metabolism
kornec00450 Selenocompound metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 53.3 %):

ATGACCACAACTTTAACCGCGCCCTTTAAAAATGACATCGTCGGCTCCTTTTTGCGTCCCCAAAAGCTCAAGGAAGCCCGGGAGCAATTCAAGCAGGGCGAACTGGATCAAGCCGGTTTAACCGCCGTGGAAGACGCCTGTATCACCGATTTAATTGAAAAGGAAAAGGCGGTCGGCCTGCACGCCGTGACCGATGGTGAATTTCGGCGGAGCTGGTGGCACCTGGACTTCTTGTGGGGGCTGACCGGGGTTGGTCACTACAACTACCACCAAAGCTACCGGTTTAAGGGTGCCAAAACCCGTACCGACAACGCCGAACTGGTCGGCAAGGTGGCCTACAACCCTGACCACCCCTTCTTCAAGCACTTCCAATTTACCAACCAGCAGGCCGGCCCGGACGTCTTAGCTAAGCAAACGATCCCGTCACCAACGATGCTCTTCCGGGATAACCGTTCCGACCACTGGCCGGACTTTTACGACCGCTACCAAGACTACTTAACTGACCTGGCAACGGCCTATCGACAAACGATCCACCGCTTTTACGAACTCGGCTGCCGTTACCTGCAAATTGACGACACCACCTGGGCCTTTTTAATCAGTAAGCTCAACGAAACTAAGGACCAACCTGGAGAACACCAAAAGTACGTCCAACTGTGCCAAGACGCCGTCACCGTAATTAACGGAGCCTTAAAAGACAAGCCGGCCGACCTAACAATTACCACCCACATTTGCCGGGGAAACTTCAAATCGACCTTCCTCTTTTCCGGTGGTTACGAACCGGTCGCTGAATACCTGGGCCAACTCAATTACGACGGTTACTTTTTGGAATACGACAGCGAAGAACGCGACGGTAACTTTGCCCCGCTCAAGAAGATCCTCAATCAGCGCGACCAGGTCACCATCGTCTTGGGGCTAATCACCTCTAAGGACGGTCAACTAGAAGACCCCGACCAAGTCATCGCCCGGATCCACGAAGCCGCTAAAGAAGTGCCACTAGCTAACCTAGCCTTAAGTCCCCAGTGCGGGTTTGCCTCCACGGAAGAAGGCAATATCTTAACCGAAGAGCAACAATGGGCCAAGCTTAAGCTCATTAAGGAGATTGCGGACGCGGTTTGGGGCTAA

Protein sequence:

MTTTLTAPFKNDIVGSFLRPQKLKEAREQFKQGELDQAGLTAVEDACITDLIEKEKAVGLHAVTDGEFRRSWWHLDFLWGLTGVGHYNYHQSYRFKGAKTRTDNAELVGKVAYNPDHPFFKHFQFTNQQAGPDVLAKQTIPSPTMLFRDNRSDHWPDFYDRYQDYLTDLATAYRQTIHRFYELGCRYLQIDDTTWAFLISKLNETKDQPGEHQKYVQLCQDAVTVINGALKDKPADLTITTHICRGNFKSTFLFSGGYEPVAEYLGQLNYDGYFLEYDSEERDGNFAPLKKILNQRDQVTIVLGLITSKDGQLEDPDQVIARIHEAAKEVPLANLALSPQCGFASTEEGNILTEEQQWAKLKLIKEIADAVWG

GenBank Info

locus_tag - FAM19471-i1-1.1_000299
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390843.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - vitamin B12 independent methionine synthase
protein_id - extdb:FAM19471-i1-1.1_000299

Gene Locus

Located on scaffold FAM19471-i1-1_scf3

FAM19471-i1-1.1_000298
FAM19471-i1-1.1_000300