update range to 10000 bp
locus tag: FAM19471-i1-1.1_000319 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R05145 Biotinyl-5'-AMP:apo-[carboxylase] ligase (AMP-forming); Biotinyl-5'-AMP + Apo-[carboxylase] <=> AMP + Holo-[carboxylase] kornec00780kornec01100
KEGG reaction
 R01074 biotin:CoA ligase (AMP-forming); biotin:apo-[carboxylase] ligase (AMP-forming); ATP:biotin adenylyltransferase; ATP + Biotin <=> Diphosphate + Biotinyl-5'-AMP kornec00780kornec01100
Ortholog
 N0.HOG0001049 biotin--[acetyl-CoA-carboxylase] ligase
KEGG gene
 K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] kornec00780kornec01100
Eggnog Protein
 EP:birA
Eggnog Ortholog
 EO:COG0340
Eggnog Description
 ED:Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
EC Number
 EC:6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase; birA (gene name); HLCS (gene name); HCS1 (gene name); biotin-[acetyl-CoA carboxylase] synthetase; biotin-[acetyl coenzyme A carboxylase] synthetase; acetyl coenzyme A holocarboxylase synthetase; acetyl CoA holocarboxylase synthetase; biotin:apocarboxylase ligase; Biotin holoenzyme synthetase; biotin:apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] ligase (AMP-forming); biotin---[acetyl-CoA-carboxylase] ligase kornec00780kornec01100
Gene Product
 biotin--[acetyl-CoA-carboxylase] ligase

Occurs in the following pathway maps:

Pathway Description
kornec00780 Biotin metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 52.9 %):

ATGGCGACCAAAGAACGGCTATTAGCCCACTTACTTTCAGCGCCAAACCAGTGGTTTTCCGGTCAGAGCCTAGCCGACCAATTAGGCGTTAGCCGGGAGTCGGTTTGGAAGGCAATTCGTTCCCTCCAACAGGCCGGCTACCAAATTGATTCGGACCGCAAACGGGGTTATTGTTACCGGGGGACTGCTAAAATGTTGGCACCCGTAATTGAACTGGGCCTAGGCACCACGAAGGTAAAACTAGTGGTGGAAGAGGAACTCGAATCAACCCAAACCACGGCCCGGCAACTACTAGCAACGGGAGATTCGACCGCCCCCCTCGTTGTGATTGCTGACCACCAAATCGGGGCCTACGGGAGGCGGGGCCGGGCCTTTTATGCCCCGAAAGCCACGGGCCTTTATATGACGATTGGGGTTCCAAACGTTACCTTTCCTGGGCAACCAGGCTTGTTAACGACCGGAGTGGCCGTAACGGTGGCAACCGTCTTAAAACGGTTTTTCCCCGCCCAAAGACTGAGTTACAAGTGGGTCAATGACCTGTACTTGGGACACCAAAAGGTAGTGGGGATTTTAACGGAAATGCAAACCGACCTGGAAGCCACTAGCCAGACCTCTTTGGTAATTGGGATTGGCATTAACTTGACCACTAAGGAATTTCCGGCTGACTTAAAAGAAAAGGTAACCGGAATTGACCCGGCGGCCACGGTTGATCGTAACCGTCTAGCTGCGGAGTTGATCGAAGCAGTCCTAAGCGACCTCCCCGACTATTCCCAAGGGATCTTTTTACCGGAGTACCGGGCACACTCCCTGATTTTGGGGCGGTCGGTAAGCCTTCAAATTGGGCAAACGACCTTTAGCGGAATCGCCCAAAACATTGATGACCAAGGCCAACTAGTGGTTAGGGCGCCTAATGGTCAGCTAAGAACCTTCTCTTCCGGGGAGGTTACTAAGGTCAACTTCTAA

Protein sequence:

MATKERLLAHLLSAPNQWFSGQSLADQLGVSRESVWKAIRSLQQAGYQIDSDRKRGYCYRGTAKMLAPVIELGLGTTKVKLVVEEELESTQTTARQLLATGDSTAPLVVIADHQIGAYGRRGRAFYAPKATGLYMTIGVPNVTFPGQPGLLTTGVAVTVATVLKRFFPAQRLSYKWVNDLYLGHQKVVGILTEMQTDLEATSQTSLVIGIGINLTTKEFPADLKEKVTGIDPAATVDRNRLAAELIEAVLSDLPDYSQGIFLPEYRAHSLILGRSVSLQIGQTTFSGIAQNIDDQGQLVVRAPNGQLRTFSSGEVTKVNF

GenBank Info

locus_tag - FAM19471-i1-1.1_000319
EC_number - 6.3.4.15
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682563.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - biotin--[acetyl-CoA-carboxylase] ligase
protein_id - extdb:FAM19471-i1-1.1_000319

Gene Locus

Located on scaffold FAM19471-i1-1_scf3

FAM19471-i1-1.1_000318
FAM19471-i1-1.1_000320