update range to 10000 bp
locus tag: FAM19471-i1-1.1_000324 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001719 APC family permease
Gene Ontology
 GO:1905039 carboxylic acid transmembrane transport
Gene Ontology
 GO:1903825 organic acid transmembrane transport
Gene Ontology
 GO:1902475 L-alpha-amino acid transmembrane transport
Gene Ontology
 GO:0098656 anion transmembrane transport
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071705 nitrogen compound transport
Gene Ontology
 GO:0071702 organic substance transport
Gene Ontology
 GO:0055085 transmembrane transport
Gene Ontology
 GO:0051234 establishment of localization
Gene Ontology
 GO:0051179 localization
Gene Ontology
 GO:0046943 carboxylic acid transmembrane transporter activity
Gene Ontology
 GO:0046942 carboxylic acid transport
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044459 obsolete plasma membrane part
Gene Ontology
 GO:0044425 obsolete membrane part
Gene Ontology
 GO:0034220 ion transmembrane transport
Gene Ontology
 GO:0031226 intrinsic component of plasma membrane
Gene Ontology
 GO:0031224 intrinsic component of membrane
Gene Ontology
 GO:0022857 transmembrane transporter activity
Gene Ontology
 GO:0022804 active transmembrane transporter activity
Gene Ontology
 GO:0016021 integral component of membrane
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0015849 organic acid transport
Gene Ontology
 GO:0015807 L-amino acid transport
Gene Ontology
 GO:0015711 organic anion transport
Gene Ontology
 GO:0015318 inorganic molecular entity transmembrane transporter activity
Gene Ontology
 GO:0015297 antiporter activity
Gene Ontology
 GO:0015291 secondary active transmembrane transporter activity
Gene Ontology
 GO:0015179 L-amino acid transmembrane transporter activity
Gene Ontology
 GO:0015171 amino acid transmembrane transporter activity
Gene Ontology
 GO:0015075 ion transmembrane transporter activity
Gene Ontology
 GO:0008514 organic anion transmembrane transporter activity
Gene Ontology
 GO:0008509 anion transmembrane transporter activity
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006865 amino acid transport
Gene Ontology
 GO:0006820 anion transport
Gene Ontology
 GO:0006811 ion transport
Gene Ontology
 GO:0006810 transport
Gene Ontology
 GO:0005887 integral component of plasma membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005342 organic acid transmembrane transporter activity
Gene Ontology
 GO:0005215 transporter activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0003333 amino acid transmembrane transport
Eggnog Protein
 EP:ydaO
Eggnog Ortholog
 EO:COG0531
Eggnog Description
 ED:amino acid
Gene Product
 APC family permease

Sequences

Nucleotide sequence (GC-content: 52.8 %):

ATGTGGCGCTATCTTAAACGTGTCTTGATCGGGAAACCATTAAAGACGCTTGACGAGGGCCAGTCGCACTTGACGAAGTTTAAGGCTTTGGCCATGCTTTCGTCCGACGCCCTTTCGTCAGTGGCCTACGGTACCGAACAGATTACCACGGTTTTAGTAACCCTTTCGACGGCCGCCATCTGGTATTCCTTACCGATTGCCGGCATTGTTTTAGTTCTGTTGTTAGCAATTACCTTGTCTTACCGGCAAATCATCCACGCTTATCCGAGCGGTGGGGGCGCCTACGTTGTCGCCACCAAAAACTGGGGGAGCAACGGGGGCCTAATCGCCGGGGGCTCGCTGCTAGTCGACTACATGTTGACGGTGGCGGTATCAACGACGTCGGGGACGGAAGCGATCACGTCTGCAATTCCTTCCCTATATAATTATTCGGTCCATATTTCAGTGGTGATTGTCTTGATCATCATGTTCATGAACCTACGGGGGATGAGTGAGAGTGCTAACTTCCTGACCATTCCGGTCTATTTTTTCATAATCATGATGACGGTGATGATCGTCTGGGGTGGCTATAACATCGCTACCGGTCACGTGGCTTACCACGCCACGGCCAATTACGGGACGCCGGTAGCCGGGATGTCTGCCATCCTGTTCATCCGGGCTTTTTCGGCCGGGTCATCTTCTTTGACCGGTGTCGAGGCGATCTCCAATGCCGTACCGAACTTTAACCCTCCTAAGAAGAAAAACGCCGCCAACACCTTGGCAATGATGAGCCTGATCTTAGCGGCCTTCTTCGGTGGGGTGACCTTCCTGTCCTTTTACCTGGGAATTGTACCGAACCCGCACCACACCGTCTTGTCCCAGATTGGGGCGGCCGTTTTTGGTGGCGAGGGCCTAGGTTACTACCTCTTGCAACTGTCGACGGCGATGATCTTAGCCGTGGCGGCTAACACTGGGTTCTCGGCCTTTCCAATTTTGGCCTTCAACATGGCCAAGGATAAGTACCTCCCGCACGCCTTTATGGACCGTGGGGACCGGCTAGGCTATTCCAACGGGATTATTTCCCTGGCGGTCGGGGCGATCGTGTTGATCATCCTTTTCCACGGGAAGACCAACCTATTGATCCCGCTCTACGCCGTCGGGGTGTTCGTACCGTTTACCCTCTCGCAGTCCGGGATGATTATCCACTGGTTCCGCTTAAAGGAAGGGAATTGGCTGGTTAAGTCAACCATTAACCTGGTGGGGGCGTTAATCTCACTAGCCCTCGTGATCTTCTTGTTCTGGCAACACTTCTCCAACGTGTGGCCGTACCTGATCATCATGCCGGCCCTCTTGTACCTGTTCCACGTCATTCACACCCACTACATCAAGGTGGGGATGCAACTGCGGGTAGCGGAAAAGGCTAAGGTTCAGTTGCATGATTACGACGGGGCCACCGTGATTGTTTTAGTCGGGAACGTGACACGGGTCACCATGGGCGCCATTAATTACGCCCGTTCAATTGGGGATTACGTCATCGCCATGCACGTGTCCTTTGATGAAAACCCGGGTAAGGAACATAAGACGGCCAACGAATTTAAGGCCGAGTTCCCGGACGTGCGTTTCGTTGATATTCACTCGTCCTACCGCTCGATTGCCACGCCAACGTTACGGTTCGTAGACGTGATCGCCAAGCGGGCGGCCGATAAGAATTATTCGACTACTGTATTGGTTCCGCAGTTCGTTCCAAAGCACCCGTGGCAAATGGCTTTGCACAACCAAACGAGCCTACGCTTGCGGACCCTACTGAATTCGCGGGAAAATATCATTGTTTCAACTTACAACTATCACTTGCATGAATAA

Protein sequence:

MWRYLKRVLIGKPLKTLDEGQSHLTKFKALAMLSSDALSSVAYGTEQITTVLVTLSTAAIWYSLPIAGIVLVLLLAITLSYRQIIHAYPSGGGAYVVATKNWGSNGGLIAGGSLLVDYMLTVAVSTTSGTEAITSAIPSLYNYSVHISVVIVLIIMFMNLRGMSESANFLTIPVYFFIIMMTVMIVWGGYNIATGHVAYHATANYGTPVAGMSAILFIRAFSAGSSSLTGVEAISNAVPNFNPPKKKNAANTLAMMSLILAAFFGGVTFLSFYLGIVPNPHHTVLSQIGAAVFGGEGLGYYLLQLSTAMILAVAANTGFSAFPILAFNMAKDKYLPHAFMDRGDRLGYSNGIISLAVGAIVLIILFHGKTNLLIPLYAVGVFVPFTLSQSGMIIHWFRLKEGNWLVKSTINLVGALISLALVIFLFWQHFSNVWPYLIIMPALLYLFHVIHTHYIKVGMQLRVAEKAKVQLHDYDGATVIVLVGNVTRVTMGAINYARSIGDYVIAMHVSFDENPGKEHKTANEFKAEFPDVRFVDIHSSYRSIATPTLRFVDVIAKRAADKNYSTTVLVPQFVPKHPWQMALHNQTSLRLRTLLNSRENIIVSTYNYHLHE

GenBank Info

locus_tag - FAM19471-i1-1.1_000324
inference - COORDINATES: similar to AA sequence:RefSeq:WP_006917010.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - APC family permease
protein_id - extdb:FAM19471-i1-1.1_000324

Gene Locus

Located on scaffold FAM19471-i1-1_scf3

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19471-i1-1.1_000323
FAM19471-i1-1.1_000325