update range to 10000 bp
locus tag: FAM19471-i1-1.1_000352 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 thiD
KEGG reaction
 R04509 ATP:4-amino-2-methyl-5-phosphomethylpyrimidine phosphotransferase; ATP + 4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine <=> ADP + 4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate kornec00730kornec01100kornec01240
KEGG reaction
 R03471 ATP:4-amino-5-hydroxymethyl-2-methylpyrimidine 5-phosphotransferase; ATP + 4-Amino-5-hydroxymethyl-2-methylpyrimidine <=> ADP + 4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine kornec00730kornec01100kornec01240
Ortholog
 N0.HOG0000390 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
KEGG gene
 K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] kornec00730kornec01100kornec01240
Eggnog Protein
 EP:thiD
Eggnog Ortholog
 EO:COG0351
Eggnog Description
 ED:Phosphomethylpyrimidine kinase
EC Number
 EC:2.7.4.7 phosphooxymethylpyrimidine kinase; hydroxymethylpyrimidine phosphokinase; ATP:4-amino-2-methyl-5-phosphooxymethylpyrimidine phosphotransferase; ATP:(4-amino-2-methylpyrimidin-5-yl)methyl-phosphate phosphotransferase; phosphomethylpyrimidine kinase kornec00730kornec01100
EC Number
 EC:2.7.1.49 hydroxymethylpyrimidine kinase; hydroxymethylpyrimidine kinase (phosphorylating) kornec00730kornec01100
Gene Product
 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase

Occurs in the following pathway maps:

Pathway Description
kornec00730 Thiamine metabolism
kornec01100 Metabolic pathways
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 60.7 %):

ATGACTAACGAATTTCCCCAGGCCCTGACGATCGCCGGCTCCGATTCCGGGGGTGGCGCCGGCATGCAAGCCGACCTAAAGACGATTCAGATGCGCCACGTCTTCGCGACGACGGTGGTGGTGGCGGTGACCGCCCAAAATACCCTCGGTGTCCAGGACGCCCTCGCTTTGCCGACTGAAATAATCGACGCCCAGTTCGCCTCTTTGGCTGACGACTTCAAGATTCGGGCGGCTAAAACGGGCATGCTGGCCGACGTACCCACCGTTCAGGCGGTCGTGCGCAACTTAAAGCAGTACGACTTTGGCCCCCTGACCGTCGACCCGGTCATGATAGCTAAGGGCGGCGCCAAGCTATTGGCCGACGAGGCGATTACTACCGTCAAAGAGGAACTCTTGCCGCTGGCGACCTTGGTCACCCCCAACCTGCCAGAAGCCGAGGCCCTAACCGGGTTAAAGGCGGAGCGCCCCGCTGATATGGTTAAAATCAGCCAGGCCCTGCAAAAGCTGGGTCCCAAAAACGTCCTGGTCAAGGGTGGCCACCTTGGCGGCGACCAAGCGGCCAGCGACTTCGTCTTGATGGAGGACGGCACCAGCTTTTGGATGACCTCACCACGGATCGACACCGTTCAAACTCACGGGACCGGCGACACGATTTCGGCCTGCATCACGGCCGAACTAGCCAAGGGCGTCGGGTTAGAACAGGCGATCCGGACCGCTAAGGGGTACGTAGAAGCGACGATTCGCGACACGATCCAGGTTGGCCACGGCCACGGCCCACTGAATCACTGGGCATTATAG

Protein sequence:

MTNEFPQALTIAGSDSGGGAGMQADLKTIQMRHVFATTVVVAVTAQNTLGVQDALALPTEIIDAQFASLADDFKIRAAKTGMLADVPTVQAVVRNLKQYDFGPLTVDPVMIAKGGAKLLADEAITTVKEELLPLATLVTPNLPEAEALTGLKAERPADMVKISQALQKLGPKNVLVKGGHLGGDQAASDFVLMEDGTSFWMTSPRIDTVQTHGTGDTISACITAELAKGVGLEQAIRTAKGYVEATIRDTIQVGHGHGPLNHWAL

GenBank Info

gene - thiD
locus_tag - FAM19471-i1-1.1_000352
EC_number - 2.7.1.49 --AND-- 2.7.4.7
inference - COORDINATES: similar to AA sequence:RefSeq:WP_006293522.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
protein_id - extdb:FAM19471-i1-1.1_000352

Gene Locus

Located on scaffold FAM19471-i1-1_scf4

FAM19471-i1-1.1_000351
FAM19471-i1-1.1_000353