OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_000355
locus tag:
FAM19471-i1-1.1_000355
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Product
type II CRISPR RNA-guided endonuclease Cas9
Ortholog
N0.HOG0004792 type II CRISPR RNA-guided endonuclease Cas9
KEGG gene
K09952 csn1, cas9; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Eggnog Protein
EP:cas9
Eggnog Ortholog
EO:COG3513
Eggnog Description
ED:CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses
Gene Code
cas9
Sequences
Nucleotide sequence (GC-content: 43.0 %):
G T G G A T T A C G T G A A A G A G T A T C A C A T T G G C T T G G A C A T T G G G A C A A G C T C A A T T G G C T G G G C G G T A A C G G A T A G C C A A T T T A A A C T G A T G C G T A T C A A G G G G A A G A C G G C A A T C G G G G T G C G G T T G T T T G A A G A A G G G A A G A C G G C T G C A G A A C G C C G A A C C T T C C G G A C A A C G C G G C G G C G G T T G A A G C G G C G A A A A T G G C G C T T G C A C T A C T T A G A T A A A A T T T T T G C C C C G C A C T T A C A A G A A G T G G A T G A A A A T T T C T T A C G C C G T C T G A A G C A A T C A A A T A T C C A C C C G G A A G A T C C A G C G A A G A A T C A A G C C T T C A T T G G T A A G C T C T T A T T T C C G G A T C T A C T G A A G A A G A A T G A A C G T G G T T A C C C A A C A C T G A T T A A G A T G C G C G A T G A A T T G C C A G T T G A G C A A C G C G C C C A C T A C C C A G T A A C G A A C A T C T A C A A G T T A C G G G A G G C C A T G A T T A A C G A A G A T C G C C A A T T C G A T C T G C G G G A A G T T T A C C T G G C C G T T C A C C A C A T C G T G A A G T A C C G G G G T C A C T T C T T A A A T A A C G C T A G C G T T G A T A A G T T C A A A G T G G G G A G A A T C G A T T T T G A C A A A T C C T T T A A C G T T T T G A A C G A A G C C T A C G A G G A G C T T C A A A A C G G C G A A G G T T C A T T C A C G A T T G A G C C T A G C A A G G T T G A A A A A A T T G G A C A A C T G T T G C T A G A T A C G A A G A T G C G T A A G T T G G A C C G C C A A A A A G C G G T T G C C A A A T T G T T A G A G G T G A A G G T C G C T G A C A A A G A G G A G A C C A A G C G C A A C A A G C A A A T T G C A A C G G C G A T G A G T A A G T T A G T T C T T G G C T A C A A G G C G G A C T T T G C A A C G G T A G C G A T G G C G A A T G G C A A C G A A T G G A A G A T C G A T T T A A G T T C T G A A A C C A G T G A G G A C G A G A T T G A A A A A T T C C G G G A A G A A T T G A G T G A T G C T C A A A A T G A T A T C T T A A C G G A A A T C A C T A G C C T G T T C T C G C A G A T C A T G C T G A A T G A A A T C G T G C C A A A T G G G A T G T C G A T T T C T G A A T C G A T G A T G G A T C G T T A T T G G A T G C A C G A A C G T C A A T T A G C G G A A G T T A A G G A A T A C T T G G C G A C C C A A C C A G C T A G C G C G C G G A A A G A G T T T G A C C A A G T G T A T A A C A A A T A C A T T G G G C A A G C G C C A A A G G A A A A G G G C T T T G A C C T T G A A A A G G G A C T C A A G A A G A T T T T A T C C A A A A A G G A A A A T T G G A A A G A A A T C G A T G A G T T A C T C A A G G C A G G T G A T T T C T T A C C A A A G C A A C G G A C A T C A G C C A A T G G G G T C A T C C C A C A C C A G A T G C A C C A A C A A G A A T T G G A C C G A A T T A T T G A A A A G C A A G C T A A G T A C T A C C C G T G G C T A G C A A C G G A A A A C C C A G C C A C T G G T G A A C G T G A T C G T C A C C A A G C G A A G T A T G A A C T T G A T C A G C T A G T T T C C T T C C G G A T T C C T T A C T A T G T T G G A C C G C T A G T A A C G C C T G A G G T T C A A A A G G C G A C A T C T G G C G C T A A G T T T G C T T G G G C A A A G C G G A A A G A A G A T G G G G A G A T T A C C C C T T G G A A C C T G T G G G A T A A G A T T G A C C G T G C T G A A T C A G C T G A A G C C T T T A T C A A G C G G A T G A C G G T T A A G G A T A C G T A T C T A T T A A A C G A G G A T G T C C T G C C T G C T A A C A G C T T G C T A T A C C A A A A G T A C A A C G T C T T A A A C G A A C T A A A C A A C G T T C G A G T G A A T G G A C G C C G C C T A T C A G T C G G A A T T A A A C A A G A T A T T T A C A C T G A G C T C T T C A A G A A G A A A A A G A C G G T G A A G G C A G G T G A C G T G G C C A G C C T A G T G A T G G C G A A G A C A C G A G G A G T T A A C A A G C C A A G T G T T G A A G G T T T A T C C G A T C C G A A G A A G T T C A A T T C A A A T T T G G C A A C C T A C C T T G A T C T A A A G T C A A T T G T G G G T G A C A A G G T T G A T G A T A A C C G T T A T C A A A T G G A T C T C G A A A A C A T T A T C G A G T G G C G T T C C G T C T T T G A A G A T G G G G A A A T T T T T G C G G A C A A G T T A A C T G A A G T G G A A T G G C T G A C G G A T G A G C A A C G T T C T G C C C T T G T T A A G A A A C G G T A T A A G G G C T G G G G A C G T T T A T C C A A G A A G C T A C T G A C G G G A A T C G T T G A C G A G A A C G G C C A A C G G A T C A T T G A T C T G A T G T G G A A T A C T G A T C A A A A C T T C A T G C A G A T T G T C A A C C A G C C C G T C T T T A A A G A A C A G A T T G A C C A A C T G A A C C A A A A G G C C A T C A C C A A T G A T G G G A T G A C T T T G C G G G A G C G G G T C G A G A G C G T T C T G G A T G A C G C C T A T A C T T C A C C G C A G A A C A A G A A G G C C A T C T G G C A A G T T G T T C G G G T G G T G G A A G A T A T T G T T A A A G C G G T C G G G A A T G C A C C A A A G T C G A T T T C A A T T G A A T T T G C C C G T A A T G A A G G C A A C A A G G G A G A A A T A A C C C G G A G C C G G C G T A C T C A A T T G C A G A A A T T A T T T G A A G A T C A G G C C C A T G A A T T A G T T A A G G A T A C G A G C T T G A C T G A G G A A T T G G A G A A G G C A C C G G A T C T T T C C G A T C G T T A T T A C T T C T A C T T C A C C C A A G G T G G T A A G G A T A T G T A C A C C G G T G A T C C A A T C A A C T T C G A T G A A A T T T C T A C C A A G T A T G A T A T T G A C C A C A T T T T G C C A C A A T C C T T C G T G A A G G A T G A T T C C T T A G A T A A T C G G G T G T T A G T A A G T C G G G C G G A G A A T A A T A A G A A G T C T G A C C G G G T G C C A G C T A A G C T T T A C G C A G C C A A G A T G A A A C C A T A C T G G A A C C A A C T T T T G A A G C A G G G A T T G A T C A C G C A A C G G A A G T T T G A A A A C C T G A C G A T G G A C G T T G A T C A A A A T A T T A A G T A T C G G T C A C T T G G A T T C G T G A A G C G C C A A T T A G T T G A A A C A C G C C A A G T T A T C A A G T T G A C G G C T A G C A T C T T G G G T A G T A T G T A C C A A G A A G C C G G G A C G G A C A T C A T T G A G A C T C G G G C T G G T T T A A C T A A G C A A T T A C G C G A G G A A T T C G A T T T A C C A A A G G T C C G T G A A G T A A A C G A C T A T C A C C A C G C A G T T G A T G C T T A C C T G A C G A C G T T T G C T G G G C A A T A T T T G A A C C G C C G T T A T C C G A A A T T A C G C T C C T T C T T C G T A T A C G G T G A G T A C A T G A A G T T C A A G C A C G G G T C A G A T C T G A A G C T A C G T A A C T T T A A C T T C T T C C A T G A A T T G A T G G A A G G C G A T A A G A G T C A A G G T A A G G T T G T C G A T C A A C A A A C T G G T G A A C T G A T T A C G A C A A G G G A T G A A G T A G C A G A T T A C T T T G A T T G G G T T A T T A A T C T T A A A G T T A T G C T T A T C T C A A A C G A G A C C T A T G A A G A A A C A G G T A A G T A T T T T G A T G C A T C A C A C G A A T C T T C T A G T C T T T A T T T A A A G A A T C A G A A G A A G A A A T C A A A G C T A G T T G T T C C T T T A A A A A A T A A G C T T C A A C C A G A A T A C T A T G G T G C A T A T A C A G G A A T T A C G C A A G G A T A C A T G G T T A T T C T T A A A T T A C T A G A T A A G A A G G G G G G A T T C G G G G T A T A T A G A A T T C C T A G A T A T G C G G C A G A T A T T T T A A A T A A A T G C C A T G A C G A A G T T G C T T A T C G T A A T A A G A T A G C T G A A A T A A T T T C G T C T G A T C C G C G G G C A C C A A A A T C C T T T G A A G T G G T A G T T C C A A G G G T G T T A A A A G G T A C A T T T C T T G T T G A T G G T G A A G A G A A G T T T A T T C T C A G T A G C T A T C G T T A T A A A G T C A A T G C C A C A C A A T T A A T C T T A C C A G T T A G T G A T A T A A A A C T A A T T C A A G A C A A T T T T A A A G C A C T A A A A A A A T T A A A C G T G G A G A T G C A G A C T A A G A A G C T T A T C G A G A T T T A T G A T A A C A T C C T A A G A C A G G T A G A T A A A T A T T T T A A G C T C T A T G A T A T T A A T A A G T T T A G G G C T A A A C T T C A T G A T G G A C G A A G T A A G T T C G T T G A G T T A G A T G A T T T T G G A C A A G A T G C A T C T A A A G A G A A A G T A A T A A T T A A A A T A T T A C G T G G T T T A C A T T T C G G A T C G G A T C T T C A A A A T T T A A A A G A G A T T G G A T T T G G G A C A A C A C C A T T G G G G C A A T T T C A G G T T A G T G A A G C A G G T A T A A G A T T A T C A A A C A C G G C A T T C A T A A T C T T C A A A T C A C C A A C T G G G T T G T T T A A C C G T A A G C T G T A C C T G A A A A A T C T G T A A
Protein sequence:
M D Y V K E Y H I G L D I G T S S I G W A V T D S Q F K L M R I K G K T A I G V R L F E E G K T A A E R R T F R T T R R R L K R R K W R L H Y L D K I F A P H L Q E V D E N F L R R L K Q S N I H P E D P A K N Q A F I G K L L F P D L L K K N E R G Y P T L I K M R D E L P V E Q R A H Y P V T N I Y K L R E A M I N E D R Q F D L R E V Y L A V H H I V K Y R G H F L N N A S V D K F K V G R I D F D K S F N V L N E A Y E E L Q N G E G S F T I E P S K V E K I G Q L L L D T K M R K L D R Q K A V A K L L E V K V A D K E E T K R N K Q I A T A M S K L V L G Y K A D F A T V A M A N G N E W K I D L S S E T S E D E I E K F R E E L S D A Q N D I L T E I T S L F S Q I M L N E I V P N G M S I S E S M M D R Y W M H E R Q L A E V K E Y L A T Q P A S A R K E F D Q V Y N K Y I G Q A P K E K G F D L E K G L K K I L S K K E N W K E I D E L L K A G D F L P K Q R T S A N G V I P H Q M H Q Q E L D R I I E K Q A K Y Y P W L A T E N P A T G E R D R H Q A K Y E L D Q L V S F R I P Y Y V G P L V T P E V Q K A T S G A K F A W A K R K E D G E I T P W N L W D K I D R A E S A E A F I K R M T V K D T Y L L N E D V L P A N S L L Y Q K Y N V L N E L N N V R V N G R R L S V G I K Q D I Y T E L F K K K K T V K A G D V A S L V M A K T R G V N K P S V E G L S D P K K F N S N L A T Y L D L K S I V G D K V D D N R Y Q M D L E N I I E W R S V F E D G E I F A D K L T E V E W L T D E Q R S A L V K K R Y K G W G R L S K K L L T G I V D E N G Q R I I D L M W N T D Q N F M Q I V N Q P V F K E Q I D Q L N Q K A I T N D G M T L R E R V E S V L D D A Y T S P Q N K K A I W Q V V R V V E D I V K A V G N A P K S I S I E F A R N E G N K G E I T R S R R T Q L Q K L F E D Q A H E L V K D T S L T E E L E K A P D L S D R Y Y F Y F T Q G G K D M Y T G D P I N F D E I S T K Y D I D H I L P Q S F V K D D S L D N R V L V S R A E N N K K S D R V P A K L Y A A K M K P Y W N Q L L K Q G L I T Q R K F E N L T M D V D Q N I K Y R S L G F V K R Q L V E T R Q V I K L T A S I L G S M Y Q E A G T D I I E T R A G L T K Q L R E E F D L P K V R E V N D Y H H A V D A Y L T T F A G Q Y L N R R Y P K L R S F F V Y G E Y M K F K H G S D L K L R N F N F F H E L M E G D K S Q G K V V D Q Q T G E L I T T R D E V A D Y F D W V I N L K V M L I S N E T Y E E T G K Y F D A S H E S S S L Y L K N Q K K K S K L V V P L K N K L Q P E Y Y G A Y T G I T Q G Y M V I L K L L D K K G G F G V Y R I P R Y A A D I L N K C H D E V A Y R N K I A E I I S S D P R A P K S F E V V V P R V L K G T F L V D G E E K F I L S S Y R Y K V N A T Q L I L P V S D I K L I Q D N F K A L K K L N V E M Q T K K L I E I Y D N I L R Q V D K Y F K L Y D I N K F R A K L H D G R S K F V E L D D F G Q D A S K E K V I I K I L R G L H F G S D L Q N L K E I G F G T T P L G Q F Q V S E A G I R L S N T A F I I F K S P T G L F N R K L Y L K N L
GenBank Info
gene - cas9
Gene Locus
Located on scaffold FAM19471-i1-1_scf4
FAM19471-i1-1.1_000354
