update range to 10000 bp
locus tag: FAM19471-i1-1.1_000357 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0004625 CRISPR-associated endonuclease Cas2
KEGG gene
 K09951 cas2; CRISPR-associated protein Cas2
Eggnog Protein
 EP:cas2
Eggnog Ortholog
 EO:COG3512
Eggnog Description
 ED:CRISPR (clustered regularly interspaced short palindromic repeat)
Gene Product
 CRISPR-associated endonuclease Cas2
Gene Code
 cas2

Sequences

Nucleotide sequence (GC-content: 40.5 %):

ATGCGCTTAATGGTCATGTTTGATTTGCCCACGGACACTAGTCAGCAACGAAAGCAGTATCGTCAGTTCCGTAAAAAGCTATTGAATGAGGGATTTATTATGATCCAGTACTCTGTCTACGTTCGCGTATGTACGACAAGGAGTGCGGCTGAGTTTTTGGAGAGAAGGCTTAAGGATTATTTGCCAGACCAAGGAGTCATTCAATCATTAATGCTAACGGAAAAGCAATATAGTGACATGCATTTCTTGCTTGGTGACGAGATTGAAGAAGTTAGAAATTCATCAAAGAGGACAATTGTACTATGA

Protein sequence:

MRLMVMFDLPTDTSQQRKQYRQFRKKLLNEGFIMIQYSVYVRVCTTRSAAEFLERRLKDYLPDQGVIQSLMLTEKQYSDMHFLLGDEIEEVRNSSKRTIVL

GenBank Info

gene - cas2
locus_tag - FAM19471-i1-1.1_000357
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011475522.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - CRISPR-associated endonuclease Cas2
protein_id - extdb:FAM19471-i1-1.1_000357

Gene Locus

Located on scaffold FAM19471-i1-1_scf4

FAM19471-i1-1.1_000356
FAM19471-i1-1.1_000358