locus tag:
FAM19471-i1-1.1_000358
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
type II-A CRISPR-associated protein Csn2 |
|
|
|
Ortholog
|
N0.HOG0005155 |
type II-A CRISPR-associated protein Csn2 |
|
|
Eggnog Ortholog
|
EO:28XJS |
|
|
|
Eggnog Description
|
ED:CRISPR-associated protein (Cas_Csn2) |
|
|
|
Gene Code
|
csn2 |
|
|
Sequences
Nucleotide sequence (GC-content: 39.4 %):
ATGAGATTGCAATACCATGGCCACCAACCAATTGAACTGACACCCGGTAAAGTGGTAATTTTACAAATAGAGAACCCAAGCGTCAACACCGAATTAATTCAGGGGTTGCAGGGATATAATGATTGCTTAAGGATGATTGACGATGAGTACCAAGAGCTTAATTTGAGTAAGGTAATGAAGTGGGAAGGAGACCTTGTTCTTAATCCAACCAAACTTGATAGTTACCAAACGTCACTCGATAAGATGATTGTCAAAAATCTTAGTATCGAGAAGCGAGATCGGATGAATAACCTTGCTCGAGAGGTGTTCTCAGAGATGCAAGATTCTTTGTTCGAATTCGACTTACCGTTGGAGGCGCGGTATGACGAGAGCCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTGGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAG
Protein sequence:
MRLQYHGHQPIELTPGKVVILQIENPSVNTELIQGLQGYNDCLRMIDDEYQELNLSKVMKWEGDLVLNPTKLDSYQTSLDKMIVKNLSIEKRDRMNNLAREVFSEMQDSLFEFDLPLEARYDESLLRLYKYAKIKYLTQVIRQPYGIIETDLKLHLELKDCQVLGYCNVANYLLPEQIQEFATLVEKTELAVLLVEFSEKRETLQQLKQDIYRIDRDFVDWHE
GenBank Info
gene - csn2
locus_tag - FAM19471-i1-1.1_000358
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681807.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - type II-A CRISPR-associated protein Csn2
protein_id - extdb:FAM19471-i1-1.1_000358
Gene Locus
Located on scaffold FAM19471-i1-1_scf4
FAM19471-i1-1.1_000357
