Annotations

Type Name Description Pathways
KEGG reaction
R04941 Selenocystathionine L-homocysteine-lyase (deaminating); L-Selenocystathionine + H2O <=> Selenohomocysteine + Ammonia + Pyruvate kornec00450kornec01100
KEGG reaction
R02408 L-cystine thiocysteine-lyase (deaminating; pyruvate-forming); L-Cystine + H2O <=> Pyruvate + Ammonia + Thiocysteine kornec00270kornec01100
KEGG reaction
R01286 L-cystathionine L-homocysteine-lyase (deaminating; pyruvate-forming); L-Cystathionine + H2O <=> L-Homocysteine + Ammonia + Pyruvate kornec00270kornec01100kornec01110kornec01230
KEGG reaction
R01283 L-homocysteine hydrogen-sulfide-lyase (deaminating; 2-oxobutanoate-forming); L-Homocysteine + H2O <=> Hydrogen sulfide + Ammonia + 2-Oxobutanoate kornec00920kornec01100
KEGG reaction
R01001 L-cystathionine cysteine-lyase (deaminating; 2-oxobutanoate-forming); L-Cystathionine + H2O <=> L-Cysteine + Ammonia + 2-Oxobutanoate kornec00260kornec00270kornec01100kornec01110kornec01230
KEGG reaction
R00782 L-cysteine hydrogen-sulfide-lyase (deaminating; pyruvate-forming); L-Cysteine + H2O <=> Hydrogen sulfide + Pyruvate + Ammonia kornec00270kornec01100
Gene Product
PLP-dependent transferase
Ortholog
N0.HOG0000807 aminotransferase class V-fold PLP-dependent enzyme
KEGG gene
K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2] kornec00260kornec00270kornec00920kornec01100kornec01110kornec01230
KEGG gene
K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] kornec00270kornec00450kornec01100kornec01110kornec01230
Gene Ontology
GO:1901606 alpha-amino acid catabolic process
Gene Ontology
GO:1901605 alpha-amino acid metabolic process
Gene Ontology
GO:1901575 organic substance catabolic process
Gene Ontology
GO:1901565 organonitrogen compound catabolic process
Gene Ontology
GO:1901564 organonitrogen compound metabolic process
Gene Ontology
GO:0071704 organic substance metabolic process
Gene Ontology
GO:0065007 biological regulation
Gene Ontology
GO:0050794 regulation of cellular process
Gene Ontology
GO:0050789 regulation of biological process
Gene Ontology
GO:0050667 homocysteine metabolic process
Gene Ontology
GO:0048522 positive regulation of cellular process
Gene Ontology
GO:0048518 positive regulation of biological process
Gene Ontology
GO:0046395 carboxylic acid catabolic process
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0044282 small molecule catabolic process
Gene Ontology
GO:0044281 small molecule metabolic process
Gene Ontology
GO:0044273 sulfur compound catabolic process
Gene Ontology
GO:0044248 cellular catabolic process
Gene Ontology
GO:0044238 primary metabolic process
Gene Ontology
GO:0044237 cellular metabolic process
Gene Ontology
GO:0043436 oxoacid metabolic process
Gene Ontology
GO:0043418 homocysteine catabolic process
Gene Ontology
GO:0042127 regulation of cell population proliferation
Gene Ontology
GO:0019752 carboxylic acid metabolic process
Gene Ontology
GO:0016846 carbon-sulfur lyase activity
Gene Ontology
GO:0016829 lyase activity
Gene Ontology
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Gene Ontology
GO:0016740 transferase activity
Gene Ontology
GO:0016054 organic acid catabolic process
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0009063 cellular amino acid catabolic process
Gene Ontology
GO:0009056 catabolic process
Gene Ontology
GO:0008284 positive regulation of cell population proliferation
Gene Ontology
GO:0008152 metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0006807 nitrogen compound metabolic process
Gene Ontology
GO:0006790 sulfur compound metabolic process
Gene Ontology
GO:0006520 cellular amino acid metabolic process
Gene Ontology
GO:0006082 organic acid metabolic process
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005575 cellular_component
Gene Ontology
GO:0004123 cystathionine gamma-lyase activity
Gene Ontology
GO:0003962 cystathionine gamma-synthase activity
Gene Ontology
GO:0003824 catalytic activity
Gene Ontology
GO:0003674 molecular_function
Gene Ontology
GO:0000098 sulfur amino acid catabolic process
Gene Ontology
GO:0000096 sulfur amino acid metabolic process
Eggnog Protein
EP:mccB
Eggnog Ortholog
EO:COG0626
Eggnog Description
ED:cystathionine
EC Number
EC:4.4.1.8 Transferred to 4.4.1.13
EC Number
EC:4.4.1.2 homocysteine desulfhydrase; homocysteine desulfurase; L-homocysteine hydrogen-sulfide-lyase (deaminating) kornec00920kornec01100
EC Number
EC:4.4.1.1 cystathionine gamma-lyase; homoserine deaminase; homoserine dehydratase; cystine desulfhydrase; cysteine desulfhydrase; gamma-cystathionase; cystathionase; homoserine deaminase-cystathionase; gamma-CTL; cystalysin; cysteine lyase; L-cystathionine cysteine-lyase (deaminating); CGL kornec00260kornec00270kornec00450kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00260 Glycine, serine and threonine metabolism
kornec00270 Cysteine and methionine metabolism
kornec00450 Selenocompound metabolism
kornec00920 Sulfur metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 60.1 %):

ATGACTAAACTTGATACCCAGCTGGTGCACGGGCCAGCCGTTAATGACAACTGTACCGGCGCCGTGACCACGCCGATTTACAAGGCAACAACCTTTGAATACCCCGAAATTGGGGCGCCGGTGACCTACGATTACTCGCGCTCGGGGAACCCGACCCGCCAGGCGGTCGAAAATCAACTGGCGACCTTGGAAGGGGGCCAGCGGGCCTTCACCTTTGCCTCCGGGATGGCCGCTATCCACGCCGCCTTGGCGATCTTTAAGGCCGGCGATCACCTGATCGTGGGTGACCAAATTTACGGCGGCACCTTCCGCTTGCTTTACCAATTTTTCGCCCGCTGGGGGCTTGAAATCACGGCGGTCGACACCCGCGACCCGCAAGCCATTGAGACCGCCATCCAGGACAACACCAAGGCAATTTACTTTGAACCGGTTACCAACCCCTTGTTGCAGGTGACCTCGGTACGCCAGGTGGCCGTGATTGCCAAGCAACACGGGCTCCTGACGATCGTCGATAACACCTTTTTGAGCCCCTACCTCTTAAAGCCACTAGAGTTGGGCGCCGATCTGGTCATCCATTCGGCGACTAAGTACTTAGCCGGGCACTCGGAACTCTCGGCCGGGGCCGTGATCGTCAACGATCCGCGCTTAGCCGACCGGGTTTACTTCGTCCAAAACGCCCTCGGCGGGATTTTGTCGCCGGAGGGGGCCAACGAACTGGCCCGCGGGATCAAGACACTCGGGATCCGCTTGGACCGCCAAATTGAAAACCTGGTGGAAGTCGTGAAGTTCCTGGAAACCCGGCCGGAAGTCCAGCGGGTGTACTACCCGGGGTTGCCGGGCCACGAGGGTTACGAAGAATTGCGCCAGGAGGCCAAGGGGGCCGGGGCGGTGCTCTCCTTTGAGCTAAGCGGGGCGGTCGACCCGGTCGCCTTCGTCAACGGCCTGCGCCTCTTCACCCGCGCCGTTAGCCTCGGGGCCGTCGAGAGCCTGGTCGAGTTGCCCAGCAAGATGAGCCACGCCGAATTAACGTCCGAAGAACAGTTGGCGGCCGGGATTAAACCGGGGCTGATCCGGTTGGCGATCGGGATCGAAGACGTGACCGACCTGATTGAAGACCTCGCCCAGGCGCTGGACCAAGCCGAACTAGTGACTACCAAAGGAAGTGTTGAAGATGACCAAACAACCGCAATCAATTGA

Protein sequence:

MTKLDTQLVHGPAVNDNCTGAVTTPIYKATTFEYPEIGAPVTYDYSRSGNPTRQAVENQLATLEGGQRAFTFASGMAAIHAALAIFKAGDHLIVGDQIYGGTFRLLYQFFARWGLEITAVDTRDPQAIETAIQDNTKAIYFEPVTNPLLQVTSVRQVAVIAKQHGLLTIVDNTFLSPYLLKPLELGADLVIHSATKYLAGHSELSAGAVIVNDPRLADRVYFVQNALGGILSPEGANELARGIKTLGIRLDRQIENLVEVVKFLETRPEVQRVYYPGLPGHEGYEELRQEAKGAGAVLSFELSGAVDPVAFVNGLRLFTRAVSLGAVESLVELPSKMSHAELTSEEQLAAGIKPGLIRLAIGIEDVTDLIEDLAQALDQAELVTTKGSVEDDQTTAIN

GenBank Info

locus_tag - FAM19471-i1-1.1_000372
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681781.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - PLP-dependent transferase
protein_id - extdb:FAM19471-i1-1.1_000372

Gene Locus

Located on scaffold FAM19471-i1-1_scf4


Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm

FAM19471-i1-1.1_000371
FAM19471-i1-1.1_000373