update range to 10000 bp
locus tag: FAM19471-i1-1.1_000379 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R04559 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole AMP-lyase; 1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole <=> Fumarate + 1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide kornec00230kornec01100kornec01110
KEGG reaction
 R03307 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing); 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate <=> 3-Carboxy-cis,cis-muconate kornec00362kornec01100kornec01120kornec01220
KEGG reaction
 R01083 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming); N6-(1,2-Dicarboxyethyl)-AMP <=> Fumarate + AMP kornec00230kornec00250kornec01100kornec01240
Ortholog
 N0.HOG0000657 adenylosuccinate lyase family protein
KEGG gene
 K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] kornec00362kornec01100kornec01120kornec01220
KEGG gene
 K01756 purB, ADSL; adenylosuccinate lyase [EC:4.3.2.2] kornec00230kornec00250kornec01100kornec01110kornec01240
Eggnog Ortholog
 EO:COG0015
Eggnog Description
 ED:Adenylosuccinate lyase C-terminus
EC Number
 EC:5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase; beta-carboxymuconate lactonizing enzyme; 3-carboxymuconolactone hydrolase; 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing) kornec00362kornec01100kornec01120
EC Number
 EC:4.3.2.2 adenylosuccinate lyase; adenylosuccinase; succino AMP-lyase; 6-N-(1,2-dicarboxyethyl)AMP AMP-lyase; 6-N-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) kornec00230kornec00250kornec01100kornec01110
Gene Product
 adenylosuccinate lyase

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec00250 Alanine, aspartate and glutamate metabolism
kornec00362 Benzoate degradation
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01220 Degradation of aromatic compounds
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 41.9 %):

ATGAGTAGTGTTTTAGATTCAAAATTGATGCAAGGAAACTTTAGTACTCCTGAAATCCGGGAAATTTGGAGTGACCACAACAAATTGCAAGCACAATTAGTAGTGGAAGCAACACTGTCAGAGGTTGAGGGTGAACTAGGGGTAATACCACCAGAGGCAGGTGAACAGATAGCCCAAGTTGCTAAGGTGGAAAATTTTGACTTGGATGCGCTAGTAAGAGAGAGTGCTGAAAAACGTCATTCCCTAATTGCTTTGATTTATAGACTTCAATATCTAGCAGGGGAAAGCGCAGGGGAGTTTGTTCACTTTGGGGTTACTACGCAAGATATTGTTGATACGGGAATTATGTTGCAGACTAAGCAAGCCTTTGAAGTGATTTTGGAGCATACACAAAAGTTAATTGAAGTCTTAACTGAGCAAGTACAACGTTACCGTGAAACGCCCATGATTGGTCGAACACATGGCATTCAAGCAATTCCTATTACCTTTGGCTTTAAATTAGCGGTATGGTTAGATGAACTAGTCCGTAGTTACCAACGATTACAAACCCTAATTGATCACCAGGTTTTTGTGGGTAGTATTAGCGGGGCGGTTGGAACATACGCTGCGTTTGGTGGTGATGGTCCTGCCGTAGAAAAGGAAGTATTAACTCGTTTAGGCTTGGACGTACCTAATATTTCATGGCAATCTTCCCGCGATCGACTTTCTGAAATTGCAGAAGTTTTGGGGATTTATTCCGGGACCTTAGGGAAAATTGGCCATGAGCTATTTAACCTAATGAAAACGGAAGTTAATGAAGTAACCGAACCATTTAAAAAGGGGGAAGTTGGTTCTTCAACAATGCCACAAAAACGTAATCCAGCTTTACTAGAGGGGCTTGCTAGTTTAACCCAACCGGTATTTAGCGATGTAGCGTTAATTCACCAATCAATGCTCTTTGATGGGGAACGAGATGCGATTCATTGGCGAAATGAGTGGGTAGCTCTACCAGAAATTACAAATTACTTAGATGCTCAAATCGTTAATGCTACATATATCCTCAGTGAGCTCAACGTGAACGAAGATCAAATGAAAAAGAATATCGCTTTACAAGGTGGACTACCGTTTGCAGAAAAGATTATGTTTGAATTGGGAACGATCATTGGCAAACAAACAGCTCACGAAGTAGTTTATGAGAGTGCCATGACCGCAATTGAACAACACCGTAATTTCTTAGAAGTGCTCTACCAACGGGAAGAGGTAAATCATTACTTCAAGCGGTCTGACCTTGATGAATGGGCAAAAGCGGAAAACGACCTTGGAAACATTAGTCAACGGATTGAACTCGTTGTAAAAAATGCAGGCCGGGTTTTGGCAAAGGGGGCTTGGGATCTTGAACGAGACCAGGTTAGTCGCGAAGCAATTACAGCAAAAGAGTGA

Protein sequence:

MSSVLDSKLMQGNFSTPEIREIWSDHNKLQAQLVVEATLSEVEGELGVIPPEAGEQIAQVAKVENFDLDALVRESAEKRHSLIALIYRLQYLAGESAGEFVHFGVTTQDIVDTGIMLQTKQAFEVILEHTQKLIEVLTEQVQRYRETPMIGRTHGIQAIPITFGFKLAVWLDELVRSYQRLQTLIDHQVFVGSISGAVGTYAAFGGDGPAVEKEVLTRLGLDVPNISWQSSRDRLSEIAEVLGIYSGTLGKIGHELFNLMKTEVNEVTEPFKKGEVGSSTMPQKRNPALLEGLASLTQPVFSDVALIHQSMLFDGERDAIHWRNEWVALPEITNYLDAQIVNATYILSELNVNEDQMKKNIALQGGLPFAEKIMFELGTIIGKQTAHEVVYESAMTAIEQHRNFLEVLYQREEVNHYFKRSDLDEWAKAENDLGNISQRIELVVKNAGRVLAKGAWDLERDQVSREAITAKE

GenBank Info

locus_tag - FAM19471-i1-1.1_000379
EC_number - 4.3.2.2
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638887.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - adenylosuccinate lyase
protein_id - extdb:FAM19471-i1-1.1_000379

Gene Locus

Located on scaffold FAM19471-i1-1_scf4

FAM19471-i1-1.1_000378
FAM19471-i1-1.1_000380