locus tag:
FAM19471-i1-1.1_000384
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
transporter substrate-binding domain-containing protein |
|
|
|
Ortholog
|
N0.HOG0003855 |
transporter substrate-binding domain-containing protein |
|
|
KEGG gene
|
K02030 |
ABC.PA.S; polar amino acid transport system substrate-binding protein |
|
|
Eggnog Protein
|
EP:cjaA |
|
|
|
Eggnog Ortholog
|
EO:COG0834 |
|
|
|
Eggnog Description
|
ED:ABC transporter substrate-binding protein |
|
|
Sequences
Nucleotide sequence (GC-content: 49.4 %):
ATGAAGAAGATTCAAAAATTAATAGTAGGGTTGTTAACCGTCCTGAGTATCTTTTCGCTCGTTTCCTTTGCCGGCCTGTCTTCAGCCAAGGCCGACAGCAACCAAAGTTCCGTTTCGGCGATTAAAAAGCGCGGTTACATCCGGATCGCCGTTTTTGGCGACTTACAACCATACGGCTGGGTCAACAAGGACGGTAAGCGGGTTGGTTACGACGTCCGGTTAGCCCGGCAGATTGCCAAGGACCTCGGGGTCAAGGTTAAGTTTGTCCAGGTGAACGCTAACAACCGGGTCGACACCCTGAATTCTAATAAGGCCGACCTGGTCTTGGCAAACTTCACCGTGACCGACGAACGTAAGCAAGTGGTTGACTTTGCTAAGCCATACATGAAGGTTTCAATCGGGGTCGTTTCCCTGAAGTCCGACCCGATCACTAAGGTCAGCCAATTGAAGAACAAGAGCATCATCATCAACAAGGGGACGACGGCCGAAAACTACTTCGTTTCCAACCAATCCAAGCTCGGCATCAAGTCGATCTTGAAGTTTGACACCAAGACCCAACAGTTTAACGCCTTAAAGAACAAGCGGGCTAACGCCTTGGCTGATGATAACTCCTACCTTTACGCTTGGGTTAAGAAGAACCCGAAGTACACGGTCGGCATCAAGACCCTCGGGCCTTCCCAAGACATTTCCCCGGCCGTCAAGAAGGGCAACAAGTCACTGTTGAACTGGACCAACAAGGAAATCACCAAGCTCAACGAGGACGGCTTCTTTAAGACCGACTTTAACAAGGAACTCAAGCCGTACTTCGGTAGTGAAGTCAAGGCTTCCGACATTATCATCACTAACGATAAATAA
Protein sequence:
MKKIQKLIVGLLTVLSIFSLVSFAGLSSAKADSNQSSVSAIKKRGYIRIAVFGDLQPYGWVNKDGKRVGYDVRLARQIAKDLGVKVKFVQVNANNRVDTLNSNKADLVLANFTVTDERKQVVDFAKPYMKVSIGVVSLKSDPITKVSQLKNKSIIINKGTTAENYFVSNQSKLGIKSILKFDTKTQQFNALKNKRANALADDNSYLYAWVKKNPKYTVGIKTLGPSQDISPAVKKGNKSLLNWTNKEITKLNEDGFFKTDFNKELKPYFGSEVKASDIIITNDK
GenBank Info
locus_tag - FAM19471-i1-1.1_000384
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681756.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transporter substrate-binding domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_000384
Gene Locus
Located on scaffold FAM19471-i1-1_scf4
FAM19471-i1-1.1_000383
