update range to 10000 bp
locus tag: FAM19471-i1-1.1_000399 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 ybeY
Gene Product
 rRNA maturation RNase YbeY
Ortholog
 N0.HOG0001209 rRNA maturation RNase YbeY
KEGG gene
 K07042 ybeY, yqfG; probable rRNA maturation factor
Eggnog Protein
 EP:ybeY
Eggnog Ortholog
 EO:COG0319
Eggnog Description
 ED:Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA

Sequences

Nucleotide sequence (GC-content: 53.6 %):

ATGGAATTACAGTTGCGTGATCATACCGAAGGAAAGTTACAACCCAGTCAAGAACGGCTAGCGGAGAAGGCCTTGGCCCAAGCAGCGGAGCGACTAGACGTCCCCGAGCAAGCCGAAATGTCATTGACCTTTGTTTTAAACCCCGAGATCAGGGAGCTCAACCGTGATTACCGCGGGATTGACCGGGCGACCGACGTAATTTCCTTTGCGATTGAAGACGACGATGACCTCGCCAACCTGCCTGCAGAAATCCGCGCTGAGCTCCCCGTTGAACTAGGCGACCTGGTCATTTCAATTGATAAGGTGACCGAACAGGCCCTCTTTTTGAACCATTCGGCAGACCGCGAGCTGGGCTACTTACTGGTCCACGGCTTCTTGCACTTGAACGGCTACGATCACGAGGAGCCGGCGGATGAGAAAAAGATGTTCACCCTTCAGGAGGAGATTTTAGATGGCCTCGGACTTAGCCGGTAA

Protein sequence:

MELQLRDHTEGKLQPSQERLAEKALAQAAERLDVPEQAEMSLTFVLNPEIRELNRDYRGIDRATDVISFAIEDDDDLANLPAEIRAELPVELGDLVISIDKVTEQALFLNHSADRELGYLLVHGFLHLNGYDHEEPADEKKMFTLQEEILDGLGLSR

GenBank Info

gene - ybeY
locus_tag - FAM19471-i1-1.1_000399
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391175.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - rRNA maturation RNase YbeY
protein_id - extdb:FAM19471-i1-1.1_000399

Gene Locus

Located on scaffold FAM19471-i1-1_scf4

FAM19471-i1-1.1_000398
FAM19471-i1-1.1_000400