update range to 10000 bp
locus tag: FAM19471-i1-1.1_000408 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 tnpB
Ortholog
 N0.HOG0002859 transposase, partial
KEGG gene
 K07496 K07496; putative transposase
Gene Product
 IS200/IS605 family element transposase accessory protein TnpB
Eggnog Ortholog
 EO:COG0675
Eggnog Description
 ED:transposase

Sequences

Nucleotide sequence (GC-content: 39.8 %):

GTAATGAACCAAAGGCATAATTTTCTCCAACAAATTTCTACCGCATTAATCAAGAACCACGATTTAGTAGTAGCCGAGGAGTTGCGTAGCAAGAATTTGCTTAAAAATCATGCTTTGGCACTTAGTATTTCTGACGTTGGCTGGCGAACATTTCTTGGCATGTTGGCTTATAAAGCAAAGCTTTATGGGCGTCAATTTATCACAATCAACCCAAGAAATACTACCCAAACATGTCGCGATTGTGGCTTTGTAATGGGCACTAATGGGACGGACAAACTAACATTAGATGATAGAAACTGGACTTGTCCTAACTGTGGTATTCACCATATTCGTGACTGGAACGCAGCTAAAAACATTCTTGATAAGGGAATAGCTAAACTAGCCTAG

Protein sequence:

VMNQRHNFLQQISTALIKNHDLVVAEELRSKNLLKNHALALSISDVGWRTFLGMLAYKAKLYGRQFITINPRNTTQTCRDCGFVMGTNGTDKLTLDDRNWTCPNCGIHHIRDWNAAKNILDKGIAKLA

GenBank Info

gene - tnpB
locus_tag - FAM19471-i1-1.1_000408
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391038.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS200/IS605 family element transposase accessory protein TnpB
protein_id - extdb:FAM19471-i1-1.1_000408

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

FAM19471-i1-1.1_000407
FAM19471-i1-1.1_000409