update range to 10000 bp
locus tag: FAM19471-i1-1.1_000416 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 rod shape-determining protein MreC
Ortholog
 N0.HOG0003468 rod shape-determining protein MreC
Gene Code
 mreC
KEGG gene
 K03570 mreC; rod shape-determining protein MreC
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071554 cell wall organization or biogenesis
Gene Ontology
 GO:0065008 regulation of biological quality
Gene Ontology
 GO:0065007 biological regulation
Gene Ontology
 GO:0051128 regulation of cellular component organization
Gene Ontology
 GO:0050794 regulation of cellular process
Gene Ontology
 GO:0050793 regulation of developmental process
Gene Ontology
 GO:0050789 regulation of biological process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0043621 protein self-association
Gene Ontology
 GO:0042546 cell wall biogenesis
Gene Ontology
 GO:0030428 cell septum
Gene Ontology
 GO:0022604 regulation of cell morphogenesis
Gene Ontology
 GO:0022603 regulation of anatomical structure morphogenesis
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009273 peptidoglycan-based cell wall biogenesis
Gene Ontology
 GO:0008360 regulation of cell shape
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005515 protein binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:mreC
Eggnog Ortholog
 EO:COG1792
Eggnog Description
 ED:Involved in formation and maintenance of cell shape

Sequences

Nucleotide sequence (GC-content: 50.0 %):

ATGCAAAAGTTTTTTTCAAACCGTCGCCTAGTTATTTTAGTGGTGATTCTCGTGGTCTGCTTTAGCTTGATGGCCGGTTCCGTGGCCTTACGGAACCGGCGGAGCACGCCGCCTCTGATCCAGCAGTTTGGTGATGACATTGTCGGGATTGCCGGTAGCGTGGTAACCTACCCGGCTAACATCATCCAGGGGGGGCTGTCCAACGTTAACGAGTTAATGAATACCTACTCGGAAAACAAGGAGCTCAAGCAACAGGTTACGGAATTAGCCCAAGTTAAGGTTAGGGACCAAACCCTGGCCAAGGAAAATAAGCAGTTAAAGGCGGAACTAAAGGTAAAGTCCTCTTTGACTGATTACTCAACCATTGCCGCCTCCGTTTTAAGCCGGGACCCGTCGTCTTGGCAGGCCCAGTTAGTGATCAATAAGGGTTCCTCGGCCGGAATTAAAAAGAACATGCCGGTCTTATCCGGTGGGGGCTTGGTCGGCCGGGTTTCTCAAGTTAACAAGACCAACAGTATTGTTGAGTTGCTTAGTGATACTAGTGAATCATCGAACCGCTTTGCCATTACGATTCAAGGTACTAACGGTAAGACGGTTAACGGGATCATCACTGGCTACAACTCGTCAACCAACCAGTTGATCATGGGGCAGGTAACTTCCAAGGCCAAGATCAAGAAGGGGACCTCGGTGACGACTTCTGGATTAGGGGGAATCACGCCAAAGGGACTCTACGTCGGTAAGGTGGCTAAGATCGGAACGGATGATTACGGGCTGGCCCAAAAGGTTTACATCACCCCGGCCACGAACTTCAACGAGATCAACATTGTGACCGTCGCCAAGCTTGATGATTAA

Protein sequence:

MQKFFSNRRLVILVVILVVCFSLMAGSVALRNRRSTPPLIQQFGDDIVGIAGSVVTYPANIIQGGLSNVNELMNTYSENKELKQQVTELAQVKVRDQTLAKENKQLKAELKVKSSLTDYSTIAASVLSRDPSSWQAQLVINKGSSAGIKKNMPVLSGGGLVGRVSQVNKTNSIVELLSDTSESSNRFAITIQGTNGKTVNGIITGYNSSTNQLIMGQVTSKAKIKKGTSVTTSGLGGITPKGLYVGKVAKIGTDDYGLAQKVYITPATNFNEINIVTVAKLDD

GenBank Info

gene - mreC
locus_tag - FAM19471-i1-1.1_000416
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682795.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - rod shape-determining protein MreC
protein_id - extdb:FAM19471-i1-1.1_000416

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
SL-0455: GO:0030428 cell septum
FAM19471-i1-1.1_000415
FAM19471-i1-1.1_000417