update range to 10000 bp
locus tag: FAM19471-i1-1.1_000426 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 recombinase RecA
Gene Code
 recA
Ortholog
 N0.HOG0001088 recombinase RecA
KEGG gene
 K03553 recA; recombination protein RecA kornec03440
Gene Ontology
 GO:0071496 cellular response to external stimulus
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0051704 obsolete multi-organism process
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0044764 obsolete multi-organism cellular process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0031668 cellular response to extracellular stimulus
Gene Ontology
 GO:0030420 establishment of competence for transformation
Gene Ontology
 GO:0009991 response to extracellular stimulus
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009605 response to external stimulus
Gene Ontology
 GO:0009432 SOS response
Gene Ontology
 GO:0009294 DNA-mediated transformation
Gene Ontology
 GO:0009292 horizontal gene transfer
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0007154 cell communication
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:recA
Eggnog Ortholog
 EO:COG0468
Eggnog Description
 ED:Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA

Occurs in the following pathway maps:

Pathway Description
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 57.6 %):

TTGGCAGATCAACGAAAAGCAGCCTTAGATAACGCCCTGCGTAAGATTGAAAAGAACTTTGGGAAGGGTTCGATCATGCGGATGGGTGACGCCGCCGACACCAAGATTGCAACCATTTCCAGTGGCTCCTTAGCCATTGACGAAGCCCTCGGTGTAGGGGGGTACCCACGGGGCCGAATCATTGAAATGTACGGTCCGGAAAGTTCCGGGAAGACGACCGTCGCTCTCCACGCCGTCGCTGAAGTGCAACGCCGTGGGGGGACGGCCGCCTACATCGACGCCGAAAACGCCCTCGATCCCCAGTACGCTACCGCCCTGGGGGTTCAAATTAACGACTTGCTCTTGTCCCAACCAGACACCGGTGAACAGGGGTTGGAAATTGCCGACGCCCTGATCGCTTCGGGAGCCGTCGACATCGTGGTGGTTGACTCCGTGGCCGCCCTGGTTCCCCGGGCCGAAATCGAAGGGGAAATGGGGGACACCCACGTGGGGTTACAGGCCCGCTTGATGTCCCAAGCCCTGCGGAAGCTTTCCGGGGAAATCAACAAGACCAAGACGATCGCCATCTTCATCAACCAAATCCGGGAAAAGGTGGGGGTGATGTTTGGGAACCCGGAAACCACCCCTGGTGGTCGGGCCCTGAAGTTCTACTCAACCATTCGGATGGAAATCCGGCGCGGTGAACAACTGAAGAACGGGACCGATGTGATCGGGAACCGGGCCAAGATTAAGGTCGTGAAGAACAAGGTGGCACCGCCGTTCCGCAAGGCCGAAGTAGACATCATGTATGGGGAAGGGATCTCCAAGACGGGGGAACTGCTCGATATGGCCGTCGAAAAGGACCTGGTCAACAAGTCCGGGGCCTGGTATTCTTATGGTAACGAACGGATTGGCCAAGGGCGTGAAAACGCCAAGCAGTGGTTTGCGGACCACGAAGACGCCATGAACGAGCTGATGAACAAGGTGCGGGTGGCCTACGGGATGGAACCGGACGAAGCGCCGGCCGCCAAGGAAGGCGAACCGCAACAAGAAACGATTGAAGAAGCGTCGAGTGACAAATAA

Protein sequence:

MADQRKAALDNALRKIEKNFGKGSIMRMGDAADTKIATISSGSLAIDEALGVGGYPRGRIIEMYGPESSGKTTVALHAVAEVQRRGGTAAYIDAENALDPQYATALGVQINDLLLSQPDTGEQGLEIADALIASGAVDIVVVDSVAALVPRAEIEGEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTIRMEIRRGEQLKNGTDVIGNRAKIKVVKNKVAPPFRKAEVDIMYGEGISKTGELLDMAVEKDLVNKSGAWYSYGNERIGQGRENAKQWFADHEDAMNELMNKVRVAYGMEPDEAPAAKEGEPQQETIEEASSDK

GenBank Info

gene - recA
locus_tag - FAM19471-i1-1.1_000426
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686016.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - recombinase RecA
protein_id - extdb:FAM19471-i1-1.1_000426

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_000425
FAM19471-i1-1.1_000427