update range to 10000 bp
locus tag: FAM19471-i1-1.1_000431 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 ruvB
Ortholog
 N0.HOG0001195 Holliday junction branch migration DNA helicase RuvB
KEGG gene
 K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] kornec03440
Gene Product
 Holliday junction branch migration DNA helicase RuvB
Eggnog Protein
 EP:ruvB
Eggnog Ortholog
 EO:COG2255
Eggnog Description
 ED:The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence
EC Number
 EC:3.6.4.12 Transferred to 5.6.2.3 and 5.6.2.4

Occurs in the following pathway maps:

Pathway Description
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 58.2 %):

ATGGAACAAGACTTTGATGACGTTCTTTCAAATGAGGTCACTGATGACCAGGAGGGGCGAGACGAGGTTAGCCTGCGCCCCCAAACCCTGGCGACCTACATCGGCCAAGCGCGGATCAAACATGAACTAGCAGTCTACATTCAGGCGGCTAAGTCACGCGGGGAGGCCTTAGACCACGTCCTCTTGTACGGGCCGCCGGGGTTAGGGAAGACGACCCTAGCAATGGTGATCGCCAACGAAATGCAAGTGGCCATCAAAACCACCTCGGGGCCAGCGATTGAAAAGCCGGGTGACCTGGTGGCACTCTTAAACGACCTCAAACCGGGGGACGTCTTGTTCATCGATGAAATCCACCGCCTACCCAAGGTGGTCGAAGAAATGCTCTACTCGGCGATGGAGGACTTTTACATCGACATCGTGGTTGGCGAGGGTCCCACGGCCCACCCGGTCCACTTCCCGCTGCCGCCCTTCACCCTGATTGGGGCTACCACCCGGGCCGGGCTACTAGCGGCGCCTTTACGGGACCGGTTTGGGATCGTGGCCCGGATGGATTATTACACTACTACGGAGCTCAGCCAAATCATTGACCGTTCGGCGACCATCTTCAACACTAAGATTCAAGAAGACGGGGCCCACGAACTAGCCCTACGCTCCAGGGGCACGCCCCGAATTGCCAACCGGCTCTTAAAGCGGGTGCGTGACTTTGCCCAGGTGGGCGGTCAGGAGGCAATTGACCCGGCCACGGTTGACCGGGCCCTAGACTTATTGGCCGTTGATGACCAGGGGCTTGATGAGATTGACCGCAAGCTCCTCACCACGATGATCGAGCACTACCACGGTGGCCCGGTGGGGATCCGGACGATTGCCGCCAACATTGGCGAAGAGGTCAACACGATCGAAGAGATGTACGAACCCTACCTCCTTCAGATCGGCTTTTTGATGCGTACCCCGCGGGGGCGGGTGGTGACCCCTGCGGCCTACGAACACCTCAAGATACCCTTTGACCAGGAGGAAAATTAA

Protein sequence:

MEQDFDDVLSNEVTDDQEGRDEVSLRPQTLATYIGQARIKHELAVYIQAAKSRGEALDHVLLYGPPGLGKTTLAMVIANEMQVAIKTTSGPAIEKPGDLVALLNDLKPGDVLFIDEIHRLPKVVEEMLYSAMEDFYIDIVVGEGPTAHPVHFPLPPFTLIGATTRAGLLAAPLRDRFGIVARMDYYTTTELSQIIDRSATIFNTKIQEDGAHELALRSRGTPRIANRLLKRVRDFAQVGGQEAIDPATVDRALDLLAVDDQGLDEIDRKLLTTMIEHYHGGPVGIRTIAANIGEEVNTIEEMYEPYLLQIGFLMRTPRGRVVTPAAYEHLKIPFDQEEN

GenBank Info

gene - ruvB
locus_tag - FAM19471-i1-1.1_000431
EC_number - 3.6.4.12
inference - COORDINATES: similar to AA sequence:RefSeq:WP_019252392.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Holliday junction branch migration DNA helicase RuvB
protein_id - extdb:FAM19471-i1-1.1_000431

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

FAM19471-i1-1.1_000430
FAM19471-i1-1.1_000432