update range to 10000 bp
locus tag: FAM19471-i1-1.1_000446 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R03531 2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase; dITP diphosphohydrolase (diphosphate-forming); dITP + H2O <=> 2'-Deoxyinosine 5'-phosphate + Diphosphate kornec00230
KEGG reaction
 R02720 XTP pyrophosphohydrolase; XTP diphosphohydrolase (diphosphate-forming); XTP + H2O <=> Xanthosine 5'-phosphate + Diphosphate kornec00230kornec01100
KEGG reaction
 R02100 dUTP nucleotidohydrolase; dUTP + H2O <=> dUMP + Diphosphate kornec00240kornec01100
KEGG reaction
 R01855 2'-deoxyguanosine 5'-triphosphate diphosphohydrolase; dGTP + H2O <=> dGMP + Diphosphate kornec00230kornec01100
KEGG reaction
 R00720 Inosine 5'-triphosphate pyrophosphohydrolase; ITP + H2O <=> IMP + Diphosphate kornec00230kornec01100
KEGG reaction
 R00426 GTP diphosphohydrolase (diphosphate-forming); Guanosine 5'-triphosphate pyrophosphohydrolase; GTP + H2O <=> GMP + Diphosphate kornec00230kornec01100
KEGG reaction
 R00260 glutamate racemase; L-Glutamate <=> D-Glutamate kornec00471kornec01100
Ortholog
 N0.HOG0001141 glutamate racemase
Gene Code
 murI
KEGG gene
 K02428 - kornec00230kornec01100
KEGG gene
 K01776 murI; glutamate racemase [EC:5.1.1.3] kornec00471kornec01100
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901137 carbohydrate derivative biosynthetic process
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071554 cell wall organization or biogenesis
Gene Ontology
 GO:0070589 cellular component macromolecule biosynthetic process
Gene Ontology
 GO:0047661 amino-acid racemase activity
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0044038 cell wall macromolecule biosynthetic process
Gene Ontology
 GO:0044036 cell wall macromolecule metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042802 identical protein binding
Gene Ontology
 GO:0042546 cell wall biogenesis
Gene Ontology
 GO:0036361 racemase activity, acting on amino acids and derivatives
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0030203 glycosaminoglycan metabolic process
Gene Ontology
 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives
Gene Ontology
 GO:0016854 racemase and epimerase activity
Gene Ontology
 GO:0016853 isomerase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009273 peptidoglycan-based cell wall biogenesis
Gene Ontology
 GO:0009252 peptidoglycan biosynthetic process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008881 glutamate racemase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006024 glycosaminoglycan biosynthetic process
Gene Ontology
 GO:0006023 aminoglycan biosynthetic process
Gene Ontology
 GO:0006022 aminoglycan metabolic process
Gene Ontology
 GO:0005515 protein binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000270 peptidoglycan metabolic process
Gene Product
 glutamate racemase
Eggnog Protein
 EP:murI
Eggnog Ortholog
 EO:COG0796
Eggnog Description
 ED:Provides the (R)-glutamate required for cell wall biosynthesis
EC Number
 EC:5.1.1.3 glutamate racemase kornec00471kornec01100
EC Number
 EC:3.6.1.66 XTP/dITP diphosphatase; hypoxanthine/xanthine dNTP pyrophosphatase; rdgB (gene name) kornec00230kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec00240 Pyrimidine metabolism
kornec00471 D-Glutamine and D-glutamate metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 57.4 %):

ATGGACAATCGCCCAATTGGAGTGATGGATTCTGGCTTGGGGGGCCTTTCAGTCGTCCGGGTTATCCAGCAAAAACTACCCAACGAAGAGGTCATCTTCGTGGGCGACCAAGGTCACTTCCCGTACGGAACCAAGGATCAAGCGGAGGTCCGTCAACTGGCGCTTTCGATTGGTGCTTTTTTACTCAAGCATGACGTAAAGATGATGGTCGTGGCCTGCAATACGGCGACGGCGGCCGCACTGCCGGCCCTGCAAGCGGCGCTCCCAATTCCCGTAATTGGGGTCATTGAGCCCGGCGCCCGGGCGGCCCTGGCCCAGGATAAAAAGGGACCGATTGGGGTGATCGCCACCACGGCAACCACCACGGCCGGTACCTACCCAGCTACGATCGAACGGCTAGCGCCGGGTACCCCGGTCATTGCAAAGGCCACCCAGCCAATGGTCGAAATCGTTGAGCACGGCCAGACCGGGACGGCGAAGGCCCAAGAAGTGGTTAGTGAACAGCTAATGACCTTTAAAGAGCACCCGGTAAAAACCCTGATTATGGGCTGCACCCACTTCCCATTTTTGGCCCCGGAAATAAGTAAGGCGGTCGGACCAACGGTGGCCTTAGTCGACCCGGCTAAGGAAACGGTGGCCACGGCCAAGTTCTGGCTGGAACAGCACCAAGCAATGGGTAACCACGCCCACCCCAATTACCACCTATATTCAACGGGCAACCTCCCTGACTTAAGGGCCGGGGTGAATAAGTGGTTGTTGTCGGGGCACTTTGACTTAGGAACCGCCCAAATTGAAGAGGGGGATTAA

Protein sequence:

MDNRPIGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQLALSIGAFLLKHDVKMMVVACNTATAAALPALQAALPIPVIGVIEPGARAALAQDKKGPIGVIATTATTTAGTYPATIERLAPGTPVIAKATQPMVEIVEHGQTGTAKAQEVVSEQLMTFKEHPVKTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKFWLEQHQAMGNHAHPNYHLYSTGNLPDLRAGVNKWLLSGHFDLGTAQIEEGD

GenBank Info

gene - murI
locus_tag - FAM19471-i1-1.1_000446
EC_number - 5.1.1.3
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686045.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - glutamate racemase
protein_id - extdb:FAM19471-i1-1.1_000446

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

FAM19471-i1-1.1_000445
FAM19471-i1-1.1_000447