update range to 10000 bp
locus tag: FAM19471-i1-1.1_000447 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 XTP/dITP diphosphatase
KEGG reaction
 R03531 2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase; dITP diphosphohydrolase (diphosphate-forming); dITP + H2O <=> 2'-Deoxyinosine 5'-phosphate + Diphosphate kornec00230
KEGG reaction
 R02720 XTP pyrophosphohydrolase; XTP diphosphohydrolase (diphosphate-forming); XTP + H2O <=> Xanthosine 5'-phosphate + Diphosphate kornec00230kornec01100
KEGG reaction
 R02100 dUTP nucleotidohydrolase; dUTP + H2O <=> dUMP + Diphosphate kornec00240kornec01100
KEGG reaction
 R01855 2'-deoxyguanosine 5'-triphosphate diphosphohydrolase; dGTP + H2O <=> dGMP + Diphosphate kornec00230kornec01100
KEGG reaction
 R00720 Inosine 5'-triphosphate pyrophosphohydrolase; ITP + H2O <=> IMP + Diphosphate kornec00230kornec01100
KEGG reaction
 R00426 GTP diphosphohydrolase (diphosphate-forming); Guanosine 5'-triphosphate pyrophosphohydrolase; GTP + H2O <=> GMP + Diphosphate kornec00230kornec01100
Ortholog
 N0.HOG0001483 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
KEGG gene
 K02428 - kornec00230kornec01100
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901575 organic substance catabolic process
Gene Ontology
 GO:1901362 organic cyclic compound biosynthetic process
Gene Ontology
 GO:1901361 organic cyclic compound catabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:1901292 nucleoside phosphate catabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0055086 nucleobase-containing small molecule metabolic process
Gene Ontology
 GO:0047429 nucleoside triphosphate diphosphatase activity
Gene Ontology
 GO:0046700 heterocycle catabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0046434 organophosphate catabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044270 cellular nitrogen compound catabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044248 cellular catabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0034655 nucleobase-containing compound catabolic process
Gene Ontology
 GO:0034654 nucleobase-containing compound biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0034404 nucleobase-containing small molecule biosynthetic process
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019439 aromatic compound catabolic process
Gene Ontology
 GO:0019438 aromatic compound biosynthetic process
Gene Ontology
 GO:0018130 heterocycle biosynthetic process
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009143 nucleoside triphosphate catabolic process
Gene Ontology
 GO:0009141 nucleoside triphosphate metabolic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0009056 catabolic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006753 nucleoside phosphate metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:rdgB
Eggnog Ortholog
 EO:COG0127
Eggnog Description
 ED:Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives
EC Number
 EC:3.6.1.66 XTP/dITP diphosphatase; hypoxanthine/xanthine dNTP pyrophosphatase; rdgB (gene name) kornec00230kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec00240 Pyrimidine metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 54.5 %):

GTGTTAACACTCGTCGTTGCAACTAACAACCCCGGCAAGGCCCGGGAATTTCAAGAAATGCTCGCACCCATGGGGATCGAGGTCAAAACGTTGGCCGACTTCCCCCCATTTCCAATTGTCGAAGATGGAAACAGTTTTGAAGAAAACGCCCTAAAAAAGGCCCAGGCAGCCGTTTCAGCCCTCAACTTACCGGTGGTCGCCGACGACTCGGGCTTGATGGTTGACGCCTTAGACGGTGAGCCCGGGATTCACTCGGCGCGCTATGCCGGCGACCATAATGACGCCGCTAATAACCAAAAGCTCCTGGCCAAATTAGCTGGGGTACCGGATGAAGAGCGGACCGCCCATTTCCACACGACGATCGTGGGCCTAAAGCCAAACGGCGCCAAGCTAGTCGCCAACGGCCAAGTCAATGGTCACATTCTTCACGAATTAACCGGGACGAACGGCTTTGGCTACGACCCGCTCTTTTACGTTGACGAATTGGCAACGTCGATGGGGAACCTAACGGATGAACAAAAAAACGCCATTAGCCATCGGGGACGGGCGCTGCGGGCGTTGATGGCAGACTTTAAAGAATGGTGGGAGAAGTAA

Protein sequence:

MLTLVVATNNPGKAREFQEMLAPMGIEVKTLADFPPFPIVEDGNSFEENALKKAQAAVSALNLPVVADDSGLMVDALDGEPGIHSARYAGDHNDAANNQKLLAKLAGVPDEERTAHFHTTIVGLKPNGAKLVANGQVNGHILHELTGTNGFGYDPLFYVDELATSMGNLTDEQKNAISHRGRALRALMADFKEWWEK

GenBank Info

locus_tag - FAM19471-i1-1.1_000447
EC_number - 3.6.1.66
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390978.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - XTP/dITP diphosphatase
protein_id - extdb:FAM19471-i1-1.1_000447

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_000446
FAM19471-i1-1.1_000448