locus tag:
FAM19471-i1-1.1_000457
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000345 |
C40 family peptidase |
|
|
Gene Product
|
LysM peptidoglycan-binding domain-containing C40 family peptidase |
|
|
|
Eggnog Ortholog
|
EO:COG0791 |
|
|
|
Eggnog Description
|
ED:PFAM NLP P60 protein |
|
|
Sequences
Nucleotide sequence (GC-content: 55.3 %):
ATGCTCAAGTGCACGGTGGCCTTAGGATTTGGAACCATTGGCCTTGCAGCCGCCGGAGCAACGGCCCATGCAGACACGATCACGATTCAAAAGGGTGACACGGTGTGGGGCTATTCACAGCGCTACCACGTGACGATGGGTGACATTGTTAAAGCAAATAACTTAAAGAACCCGAACTTAATTATTGCCGGAAAGACGATTTATATTCCAACGAGTGGGGGCTCCAGTGCTTCAAGCACGGCGGCCACGGCCAGTTCAACGGCGACGAGCACCGCTACTAGCGCCACTAGTGCTAACTCAGCGCCAAGCTCGAGTGTGACGAGTTCGAGTGCCAGTGAAGTGGCCACGAACACGTCCGCTACGAGTGCGGTAAGCAGCGCCGTAGTTAGTGCTAATTCGGCTGCTGATTCTAGCGCTACTAGTACCACGAGCGCAACCAACGTTGTTAGTGCTAGTTCCGCCGTTGCTAGTGCCGACTCTGCAGTAAGTGCATCTAGCGATTCAGCCACGAGTGCGGTGGCATCTTCTGCCACCACCTCCAGTGCTGCTAGCTCCGCTTCCGCCACGAGTACGGCCAACACCACGATGGTGACGGTCTCAGCCACTAGTGCGTCCTCAGCAAGCTCATCAACGGCTTCATCAACGACCACCACTTCCACGACTACCACAAGCACGTCGGGAGTGGCTACTTACAGCGCCGCCCAAGCGGTGGCCCGTGCCGAATCCGTAATCGGTACACCATACGTATACGGTGGAAATACCACGAGCGGCTTTGACTGCTCCGGGCTAGTTCAATGGGCATATGGCCTGAGTTCTACTTACCGGACGACTTACCAACAACAAGCCTTGGGAACCCACCATTACGACGTTGAAAACGCACCGGCTGGGGCGATCGTCTTCTTTGGCTCCGATAGTGCACCGTACCACGACGGGATTTCGCTCGGGAACGGGACCTTTATCCAAGCCCCAGATACTGGTCAAACGGTTAAGATCACGAGCATGTCCGCTTACACGCCAAGCTACTACGTGGTTATCAACTAA
Protein sequence:
MLKCTVALGFGTIGLAAAGATAHADTITIQKGDTVWGYSQRYHVTMGDIVKANNLKNPNLIIAGKTIYIPTSGGSSASSTAATASSTATSTATSATSANSAPSSSVTSSSASEVATNTSATSAVSSAVVSANSAADSSATSTTSATNVVSASSAVASADSAVSASSDSATSAVASSATTSSAASSASATSTANTTMVTVSATSASSASSSTASSTTTTSTTTTSTSGVATYSAAQAVARAESVIGTPYVYGGNTTSGFDCSGLVQWAYGLSSTYRTTYQQQALGTHHYDVENAPAGAIVFFGSDSAPYHDGISLGNGTFIQAPDTGQTVKITSMSAYTPSYYVVIN
GenBank Info
locus_tag - FAM19471-i1-1.1_000457
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390983.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - LysM peptidoglycan-binding domain-containing C40 family peptidase
protein_id - extdb:FAM19471-i1-1.1_000457
Gene Locus
Located on scaffold FAM19471-i1-1_scf5
FAM19471-i1-1.1_000456
