update range to 10000 bp
locus tag: FAM19471-i1-1.1_000462 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 prepilin-type N-terminal cleavage/methylation domain-containing protein
Ortholog
 N0.HOG0004155 type II secretion system protein
KEGG gene
 K02246 comGD; competence protein ComGD
Eggnog Ortholog
 EO:COG2165
Eggnog Description
 ED:general secretion pathway protein

Sequences

Nucleotide sequence (GC-content: 49.8 %):

ATGGTCAGGCCGTTGTTCAATAGCCAACGGCGCGCCTTTACGATGGTGGAAGTCGTGATCGTATTGGCCATCAGTGCCCTAGTGATCGTGACCACTACCATTCCTTACCAAAAAAGGAACGCCGAGCTGAGTGAGGAACAGTTTTGGCGGGACGTTAAGCAGCGCTGGCAAGAGGCCCAAACCCGTGCCCGGGTAGAGGGAAAGGCGACCTTTATCTATTTGACGAGCCGATCGAAGCGAGAAATTAGATTTGAGTATCACACTGATAGTGGGAAGAAGGTAACGGAGGAGGTACTACTTCCCAAACAACTTCACATTGCCTCTAACGAAGATATGGTCAAGATTTACAAAAACGGCTACGTTAGTCCGCGGACCTGGTCCTTTGTTTCCAAGTTAACGATGACCAACTACGACATGAAAATTCAGATGGGTTGGGGGGGATACTATGTTCAAAAGACTGCGGTGTGGGGCTTTCCTGCTGGCTGA

Protein sequence:

MVRPLFNSQRRAFTMVEVVIVLAISALVIVTTTIPYQKRNAELSEEQFWRDVKQRWQEAQTRARVEGKATFIYLTSRSKREIRFEYHTDSGKKVTEEVLLPKQLHIASNEDMVKIYKNGYVSPRTWSFVSKLTMTNYDMKIQMGWGGYYVQKTAVWGFPAG

GenBank Info

locus_tag - FAM19471-i1-1.1_000462
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390987.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - prepilin-type N-terminal cleavage/methylation domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_000462

Gene Locus

Located on scaffold FAM19471-i1-1_scf5

FAM19471-i1-1.1_000461
FAM19471-i1-1.1_000463