update range to 10000 bp
locus tag: FAM19471-i1-1.1_000482 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R01086 2-(Nomega-L-arginino)succinate arginine-lyase (fumarate-forming); N-(L-Arginino)succinate <=> Fumarate + L-Arginine kornec00220kornec00250kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0001509 argininosuccinate lyase
KEGG gene
 K01755 argH, ASL; argininosuccinate lyase [EC:4.3.2.1] kornec00220kornec00250kornec01100kornec01110kornec01230
Gene Ontology
 GO:1901607 alpha-amino acid biosynthetic process
Gene Ontology
 GO:1901605 alpha-amino acid metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046394 carboxylic acid biosynthetic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0042450 arginine biosynthetic process via ornithine
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0016842 amidine-lyase activity
Gene Ontology
 GO:0016840 carbon-nitrogen lyase activity
Gene Ontology
 GO:0016829 lyase activity
Gene Ontology
 GO:0016053 organic acid biosynthetic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009084 glutamine family amino acid biosynthetic process
Gene Ontology
 GO:0009064 glutamine family amino acid metabolic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008652 cellular amino acid biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006591 ornithine metabolic process
Gene Ontology
 GO:0006526 arginine biosynthetic process
Gene Ontology
 GO:0006525 arginine metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004056 argininosuccinate lyase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:argH
Eggnog Ortholog
 EO:COG0165
Eggnog Description
 ED:argininosuccinate lyase
EC Number
 EC:4.3.2.1 argininosuccinate lyase; arginosuccinase; argininosuccinic acid lyase; arginine-succinate lyase; N-(L-argininosuccinate) arginine-lyase; omega-N-(L-arginino)succinate arginine-lyase; 2-(omega-N-L-arginino)succinate arginine-lyase (fumarate-forming) kornec00220kornec00250kornec01100kornec01110
Gene Product
 argininosuccinate lyase
Gene Code
 argH

Occurs in the following pathway maps:

Pathway Description
kornec00220 Arginine biosynthesis
kornec00250 Alanine, aspartate and glutamate metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 58.2 %):

ATGGCAGTTAAGAGAATGTGGGGGGGTCGCTTTGAAGCGACCGGTGCCAAGTGGGTCGAAGAATTTGGGGCCTCGATCTCCTTTGACCAGCAGATGGCCGCAGAAGATTTAGAGGGTTCCTTGGCCCACGTGACGATGTTAAAGGAAACCAAGATCCTGCCGGCGGCCGACGCTGACCAGATCATTACGGGGCTCAAGAAGCTCCAGGACCAACTCGAAGCAGGGGAGCTTACGTTTACGGTTGAAAATGAAGACATCCACATGAACTTAGAGGCCCTCTTGACCGAGGAGATCGGACCGGTGGCCGGCAAGCTCCACACCGCCCGGAGCAGAAACGACCAGGTGGCCACCGACCTACACCTCTACGTCAAGCACCGCCTGCCCCACGTCATCCAGGCGATCAAGGACTTGCAAAAGGTATTGGTCGAAAAGGCGGCGGCCAACGTCGAAACGATCATGCCCGGCTACACCCACTTGCAACACGCCCAACCGATCTCTTACGGCCACTACCTGATGGCCTACTTCCAGATGCTCCAGCGTGACGTCGAACGGTTTGAGTTTAACCAACAGCACACCGATCTAATGCCGTTGGGGGCGGCCGCCTTGGCCGGGACGACCTTCCCGATCGACCGGGAACTGACCGCCAAGCTCTTGGACTTTCAGGCGCCCTACGTTAATTCCTTAGACGCCGTTTCCGACCGGGATTTTGTCCTCGAATTCCTGGCCAACGCCGCCATTTTGATGACCCACCTGTCCCGGCTGTGCGAAGAGATCATCATGTGGTGTTCCTATGAATTTGGCTACCTAGAGCTGTCCGACCAGTACTCAACCGGTAGCTCGATCATGCCGCAAAAGAAGAACCCGGACATGGCCGAACTGGTCCGGGGCAAGACCGGCCGGGTCAACGGCCACCTTTTGGGGCTCTTGACCACCATCAAGGGCCTGCCGCTGGCCTACAACAAGGACTTGCAAGAGGACAAGGAAGGGCTCTTTGATGCCGTTAAGACGATCATGCCGAGCCTGAAGGTGGTGGCCGGGATGCTTGAAACCGCCCACGTCAACAAGGAGAAGATGGCGCAGGCCACGGAGCGCGACTTCTCCAACGCCACCGAGCTGGCCGATTACCTGGCCACCAAGGGGATTCCCTTCCGTCAGGCCCACGCCATCGTTGGCCAACTGGTCTTAGAGGGGCTCAAGACCGGTACGACCCTGCAGGAAATCCCGCTGGCCAAGTACCAAGAGATCGACCCGGCGATCGGCGAAGACGTTTACCACGACCTCCAATCTAAGGTGGCCGTCGAGCGGCGGAACTCGCTGGGCGGGACCGGGTTTGACCAGGTCAAAGCCCAGATTGAAGCCGCCAAGCAACTACTTTCTAAATGA

Protein sequence:

MAVKRMWGGRFEATGAKWVEEFGASISFDQQMAAEDLEGSLAHVTMLKETKILPAADADQIITGLKKLQDQLEAGELTFTVENEDIHMNLEALLTEEIGPVAGKLHTARSRNDQVATDLHLYVKHRLPHVIQAIKDLQKVLVEKAAANVETIMPGYTHLQHAQPISYGHYLMAYFQMLQRDVERFEFNQQHTDLMPLGAAALAGTTFPIDRELTAKLLDFQAPYVNSLDAVSDRDFVLEFLANAAILMTHLSRLCEEIIMWCSYEFGYLELSDQYSTGSSIMPQKKNPDMAELVRGKTGRVNGHLLGLLTTIKGLPLAYNKDLQEDKEGLFDAVKTIMPSLKVVAGMLETAHVNKEKMAQATERDFSNATELADYLATKGIPFRQAHAIVGQLVLEGLKTGTTLQEIPLAKYQEIDPAIGEDVYHDLQSKVAVERRNSLGGTGFDQVKAQIEAAKQLLSK

GenBank Info

gene - argH
locus_tag - FAM19471-i1-1.1_000482
EC_number - 4.3.2.1
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003711824.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - argininosuccinate lyase
protein_id - extdb:FAM19471-i1-1.1_000482

Gene Locus

Located on scaffold FAM19471-i1-1_scf6

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19471-i1-1.1_000481
FAM19471-i1-1.1_000483