OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_000491
locus tag:
FAM19471-i1-1.1_000491
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
KEGG reaction
R05636 1-Deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating); Pyruvate + D-Glyceraldehyde 3-phosphate <=> 1-Deoxy-D-xylulose 5-phosphate + CO2
kornec00730 kornec00900 kornec01100 kornec01110
Ortholog
N0.HOG0001792 1-deoxy-D-xylulose-5-phosphate synthase
KEGG gene
K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
kornec00730 kornec00900 kornec01100 kornec01110
Eggnog Ortholog
EO:COG1154
Eggnog Description
ED:Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EC Number
EC:2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating); DXP-synthase
kornec00730 kornec00900 kornec01100 kornec01110
Gene Product
1-deoxy-D-xylulose-5-phosphate synthase
Occurs in the following pathway maps:
Pathway
Description
kornec00730
Thiamine metabolism
kornec00900
Terpenoid backbone biosynthesis
kornec01100
Metabolic pathways
kornec01110
Biosynthesis of secondary metabolites
Sequences
Nucleotide sequence (GC-content: 57.9 %):
T T G T T A C T T G A A T A C A T T C A T T C G T C A A A A G A C G T T A A G C A A C T C A C T A A T G A C C A A C T G C A C A C C C T G G T T G A T G A G G C C C G G G C G G C G C T C T T G C A A A A G T T G A G C G T T C A C G G T G G C C A C A A C G G C C C G A A C C T C G G G G T C G T A G A A A T G A C G G T C G C C C T G C A C G C C G T C T T T G A T T C A C C A A C T G A C A A G A T T A T C T A T G A C G T T T C C C A C C A G T C C T A C G T C C A C A A G A T G T T G A C C G G A C G G G C C C A G G C T T T C T T G G A C C C G G C C C A C T A C G A T G A C G T G T C T G G T T A C A C C A A C C C C A A G G A A A G T G A C G A C G A C T T C T T C T C G A T C G G T C A C A C C T C G A C G T C C C T G G C C C T G G C C A G C G G C T T T A T C A A G G C C C G C G A C G T C T T G G G T A A C C A C G A A A A C A T C G T C G C C G T G A T C G G G G A C G G T T C C C T T T C C G G G G G C C T G G C C T A C G A A G G C T T G A A C A A C G T G G T G A C T G A A A A C T C C A A T G C G A T C G T G A T C G T C A A C G A C A A C G A C C A A T C G A T C G C C A A G A A C C C G A C C G G C G G G A T C T A C A C C G C C C T G C G C A A G C T G C G G G A A A G C A A C G G C C A G G C C G A A G A C A A C T T C T T C A C C G C C C T G G G G T A T G A G T A C C A C T A C T T A G C C G A C G G G A A C G A C C T C G A C C A G C T G A T C G C C C T C T T T A A G A G C G T C A A G G A T A C C G A T C A C C C G G T T C T C T T G C A C G T T C A A A C C G A A A A G G G G C A C G G C T T T G C T C C G G C C G A A G C C A A C C A C G A A A A G T T C C A C G C C G G C G G C C C A A T C G A C C T C A A G A C C G G T G A C T A C A A G G G G G C T G G C C A A C C G G C G G G G G A A A C T T A C G A C G C C G T C T T G T C C G A C C T A G T C T T C A A C A A G C T G A A G C A A G A C C G G T C C G T G A T C G C G C T G T C C T C G G G G A C G C C A A T G A T C A T C T T T A A C C A G G A A C A A C G C C A A G C G G C T G G C G C T C A G T T C A T G G A C G T G G G G A T T G C C G A A G A A C A G G C C A C C A C G A T G T C G G C C G C C C T G G C C A A G T A C G G C G C C A A G C C A G T T T A C C C G G T T T A C G C C A C C T T C T T A C A A C G G G C G T A C G A C G A A C T G T C G C A T G A C G T G G C C C T A A A C A A C G A C C C G G C G A C C C T C C T G G T G T A C C T G G C C G G C G C C T A C G G G A T G A A C G A C G A A A G C C A C C T C G G C C T C T A C G A C A T C C C G T T C T T G A G C C A C A T C C C G A A C T T C G T T T A C T T G G C C C C A A C C A A C A A G G A A G A G C T G G T C G C A A T G A C T A A C T G G G C G A T T G A T C A A C C A G A C C A C C C G G T T G C C A T T C G G G T T C C G G C C G T G G C G T T G G A A A C A A C C G G C C A A G C T G A C A C C A C C G A T T A C G G C G A C T T G A A C A A G A A C C A G G T G G T T C A C C A A G G T T C C A A A G T C G C C A T C T T C G G G G T C G G C A A C C T G C T C G G C T T A G C T A A G C A A G C C G C C G C T A A G T T A G C C G A A G A G G G C G T C G A C G C C A C G G T C A T C A A C C C C C G T T A C C T G A C C G G G T T G G A C A C C G A A T T G C T C G A C C A A C T C C A G G C C G A T C A C C A G G T G G T G G T G A C C C T A G A A G A C G G G A T C C T A G A G G G C G G T T A C G G T C A A A C G A T T G C C T C C T A C C T C G G T G A C A G C G C C G T G C G G G T G C A A A A C T A C G G C C T G C A A A A G G C T T A C C C G G A C C G C T A C G A C G T C A A C G A A C T G T T G G C C C A A A A C G G C T T G A C G G C T G A C A A T A T T G C C C A A C A A G C A T T A A A A G C A C T T A A C T A A
Protein sequence:
M L L E Y I H S S K D V K Q L T N D Q L H T L V D E A R A A L L Q K L S V H G G H N G P N L G V V E M T V A L H A V F D S P T D K I I Y D V S H Q S Y V H K M L T G R A Q A F L D P A H Y D D V S G Y T N P K E S D D D F F S I G H T S T S L A L A S G F I K A R D V L G N H E N I V A V I G D G S L S G G L A Y E G L N N V V T E N S N A I V I V N D N D Q S I A K N P T G G I Y T A L R K L R E S N G Q A E D N F F T A L G Y E Y H Y L A D G N D L D Q L I A L F K S V K D T D H P V L L H V Q T E K G H G F A P A E A N H E K F H A G G P I D L K T G D Y K G A G Q P A G E T Y D A V L S D L V F N K L K Q D R S V I A L S S G T P M I I F N Q E Q R Q A A G A Q F M D V G I A E E Q A T T M S A A L A K Y G A K P V Y P V Y A T F L Q R A Y D E L S H D V A L N N D P A T L L V Y L A G A Y G M N D E S H L G L Y D I P F L S H I P N F V Y L A P T N K E E L V A M T N W A I D Q P D H P V A I R V P A V A L E T T G Q A D T T D Y G D L N K N Q V V H Q G S K V A I F G V G N L L G L A K Q A A A K L A E E G V D A T V I N P R Y L T G L D T E L L D Q L Q A D H Q V V V T L E D G I L E G G Y G Q T I A S Y L G D S A V R V Q N Y G L Q K A Y P D R Y D V N E L L A Q N G L T A D N I A Q Q A L K A L N
GenBank Info
locus_tag - FAM19471-i1-1.1_000491
Gene Locus
Located on scaffold FAM19471-i1-1_scf6
FAM19471-i1-1.1_000490
