update range to 10000 bp
locus tag: FAM19471-i1-1.1_000567 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 penicillin-binding protein
Ortholog
 N0.HOG0001269 penicillin-binding protein 2
KEGG gene
 K12556 pbp2X; penicillin-binding protein 2X kornec00550kornec01100kornec01501
KEGG gene
 K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-] kornec00550kornec01100kornec01501
KEGG gene
 K08724 pbpB; penicillin-binding protein 2B kornec00550
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:pbpX
Eggnog Ortholog
 EO:COG0768
Eggnog Description
 ED:Penicillin-binding Protein

Occurs in the following pathway maps:

Pathway Description
kornec00550 Peptidoglycan biosynthesis
kornec01100 Metabolic pathways
kornec01501 beta-Lactam resistance

Sequences

Nucleotide sequence (GC-content: 50.8 %):

ATGGATAAGCGCCAGCAAAAGAAACGAACGATAAATGGGGAGAACAGGCGAAACCGAAAGACCTTTGGGATGTGGTTCTTTTTGGTAGCGGCCATAATTTTCATTCTGTTTACCGTTCGTTTTAGTTATATTGCCATCTTTAAGGATGTTCAAAACCATAACTTAAAATCGCAGGCGGCCAAGCTCTACACTAGCTCGCAAGTGATTCAAGCCAAGCGGGGGACGGTCTACGATGCCGACGGGAACCCGATCGCCACGGACACTAGCAAGTACACCGTTTATGCCATCATTGATTCCAGCTACCGCTCGGCAAGCGGCAAGGCCCTGTACGTCACTAACAAGAAGAAGACGGCTAAAGTGTTAGCTAAGTACTTAGACCTAAGTGAAGCCCAGATTCTCAAGATCCTCTCGCCAAGTAGTAAGGGAATCTTTCAGGTTCAGTTTGGGACGGCCGGCTCTAACCTGTCAGTCGCCACGATGGAAAAGATTAAAAAGGCAAACCTACCAGGGATTAACTTCACGCAAATCCCGGCCCGGGAATATCCCGAGGGCAACTTTGCTAGCCAGCTGCTCGGGATGACCACGTTAAAAACCAACACCAAAACCGGGACCACCCAGTTAGTGGGGGACATGGGGTTAGAAGGGTACTTTAACAAACAGCTGACCGGGACGAATGGTTACCGAACCGTAAAACAAGACGTTTATGGTTACCAACTGGCTGATTCGTCAACGAAGGGGCGTAAGGTTGAAAACGGGGATAACATCACCACGACTTTAAACAATAAGGTCCAACACCAGATGGAAACCTTAGTGTCCAAGGTGGAAAAGGAAACCCAAGCAGAAGGGATTACCGCCATCGTGATGGAAGCCAAGACCGGGAAAATCGTGGCGGCCACCCAACGGCCAAACATGAAGTCCGAAACCCCTTCTTGGACCAACGCATTAACGCAGCAAACCTTTGAACCTGGTTCGACGATGAAGGTGCTAGCCTTAGCAGCCGCCATTAACAGCGGAAACTTTGACCCTAACGCCACTTACACTTCAGGAACGTGGAGCCTTGGTGGGGGGAAGATCACCGACTGGGTGACCAGTGGGTGGGGAACCATCACCTATAAAGAGGGGTTTTACCGCTCCTCTAACGTTGGGTTTGCCCACGTTGAACAAAACATGGGCGCCAAGACCTGGATGAAATACATCCGCCGCTTCGGCCTCCTAAAGAAGGTCAACGTATACGGCATGGGGAACGAAACGGCGGGTTACACCACCTTTAAGGGAAAGCTAGAACAGGCCAACACCGCCTATGGTCAGGGGATTACCGTTAACGTGATGGAACTGATGCAAGCCTATACTGCCATTGCCAACAACGGAAAAATGGTTAAGCCCTACTGGATCGAAAAGGTGACCGACCCCAACACCGGTAAGACGGTGAAGAAACTGTCAACCACCGTGGTGGGGCACCCAATTTCCGCTTCGACGGCTAAACAGGTCCGTAAGTACATGGAAGGGGTCATTTACAACAAGGTCGGAACTGGGCAGTCCTATAAGGTCAGTGGGTACCGGATTGCCGGGAAGACCGGGACGGCCCAAATTGCCGGGACAAACGGTTACGAGACCGGGACGAATGATTACATCTACTCTTTTGCCGGCTTTGCCCCGGCTAAAAACCCCAAGTACATCATCTACCTATCGATGAAAAAGCCGAAGAATTTAACTAAGGCGGCGGAAACCCACCTGTCGTCAATTTCAACGCCGATCATCAAGTACCTTTTGGACCAAGAAAAGCTCAAGTCCGAGGGGCAACAAGGGGTAGTCAAGGTTGGTAACTACGTCGGCAAGAATGCCCAAACGGTGCAAACAAGCCTGGCGAAAAAGAAGTTGCAAGTCACCGTGATTGGTGGCAATAAAAAGATCACCGCCCAGTCGTTGACGGCTGGTAAAGAGGCGATCATCAACAGCCGTTTGATCTTAAAGACCAGCGGCGAAATGACGATGCCAGACGTTTCTGGCTGGTCACAAGCAGACGTGGCCCAGTTGGCACAAATGATGGGGCTAAAACTATCATTAACCGGGAGCGGCTACGCAAGTAACCAATCAATCAGCGTGGGCACCCCCGTTAAGGCGGGCGACAGCTTGAAGGTTGCTTATACGGGAAAGTAA

Protein sequence:

MDKRQQKKRTINGENRRNRKTFGMWFFLVAAIIFILFTVRFSYIAIFKDVQNHNLKSQAAKLYTSSQVIQAKRGTVYDADGNPIATDTSKYTVYAIIDSSYRSASGKALYVTNKKKTAKVLAKYLDLSEAQILKILSPSSKGIFQVQFGTAGSNLSVATMEKIKKANLPGINFTQIPAREYPEGNFASQLLGMTTLKTNTKTGTTQLVGDMGLEGYFNKQLTGTNGYRTVKQDVYGYQLADSSTKGRKVENGDNITTTLNNKVQHQMETLVSKVEKETQAEGITAIVMEAKTGKIVAATQRPNMKSETPSWTNALTQQTFEPGSTMKVLALAAAINSGNFDPNATYTSGTWSLGGGKITDWVTSGWGTITYKEGFYRSSNVGFAHVEQNMGAKTWMKYIRRFGLLKKVNVYGMGNETAGYTTFKGKLEQANTAYGQGITVNVMELMQAYTAIANNGKMVKPYWIEKVTDPNTGKTVKKLSTTVVGHPISASTAKQVRKYMEGVIYNKVGTGQSYKVSGYRIAGKTGTAQIAGTNGYETGTNDYIYSFAGFAPAKNPKYIIYLSMKKPKNLTKAAETHLSSISTPIIKYLLDQEKLKSEGQQGVVKVGNYVGKNAQTVQTSLAKKKLQVTVIGGNKKITAQSLTAGKEAIINSRLILKTSGEMTMPDVSGWSQADVAQLAQMMGLKLSLTGSGYASNQSISVGTPVKAGDSLKVAYTGK

GenBank Info

locus_tag - FAM19471-i1-1.1_000567
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682138.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - penicillin-binding protein
protein_id - extdb:FAM19471-i1-1.1_000567

Gene Locus

Located on scaffold FAM19471-i1-1_scf7

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19471-i1-1.1_000566
FAM19471-i1-1.1_000568