update range to 10000 bp
locus tag: FAM19471-i1-1.1_000604 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001089 helix-hairpin-helix domain-containing protein
KEGG gene
 K02237 comEA; competence protein ComEA
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:comEA
Eggnog Ortholog
 EO:COG1555
Eggnog Description
 ED:Competence protein ComEA
Gene Product
 competence protein

Sequences

Nucleotide sequence (GC-content: 56.0 %):

TTGACGGTGGAAAAATTAGTCGAACAGCTCCAGGCCCTGTGGGAAGAGCACCGTTCACAAATCTACGTTGTCATCGGCTTGGTGCTAGCAGTGGGTTTTTGGTGGTGGCATACCCACCAACCGGTTACCGACGCGGTAGGGGCGACTAGCCAGTCGAGCGCCTATTCGGCAACCAGTGCGGTGACCAGTAGCCTAGCAACTAGTACCGAAAACGGTTCGGGGCGGGTGTGGGTGGACGTAAAGGGGGCCGTTAATAAGCCAGGGGTTTACCACTTGAAAAAGGGGGCCCGGGTGCAAGAGGCCATCGCTGCGGCGGGGAGTCAGACGTCGTTAGCCGACTTAAACCAGGTTAACTTAGCTAAGGAGCTCCAAGACCAACAGGTCGTGTACGTACCGGCCCAAGGAGAAAAAGTGGCGGATGCGACGACGGCGACCACCGGGACTACGGACGCCACGAGCGCTACGAGCCAAAGCGGTCAGGGTGATTCGGTTAACCTAAACACGGCGACTAAAGAGCAGCTGCAAACAATCGATGGGATTGGTGACAAAAAGGCGGATAAGATCATTGCCTACCGGCAGGAACACGGCGGTTTCAAGACGGTCGAGGACTTGAAAAACGTTGACGGCTTTGGCGATAAAACGGTGGCCAAAATCAAAGACCGGCTGGCGGTTTAG

Protein sequence:

MTVEKLVEQLQALWEEHRSQIYVVIGLVLAVGFWWWHTHQPVTDAVGATSQSSAYSATSAVTSSLATSTENGSGRVWVDVKGAVNKPGVYHLKKGARVQEAIAAAGSQTSLADLNQVNLAKELQDQQVVYVPAQGEKVADATTATTGTTDATSATSQSGQGDSVNLNTATKEQLQTIDGIGDKKADKIIAYRQEHGGFKTVEDLKNVDGFGDKTVAKIKDRLAV

GenBank Info

locus_tag - FAM19471-i1-1.1_000604
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686380.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - competence protein
protein_id - extdb:FAM19471-i1-1.1_000604

Gene Locus

Located on scaffold FAM19471-i1-1_scf7

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19471-i1-1.1_000603
FAM19471-i1-1.1_000605