locus tag:
FAM19471-i1-1.1_000643
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000121 |
IS3 family transposase |
|
|
KEGG gene
|
K07497 |
K07497; putative transposase |
|
|
Gene Product
|
IS3 family transposase |
|
|
|
Eggnog Ortholog
|
EO:COG2801 |
|
|
|
Eggnog Description
|
ED:Transposase and inactivated derivatives |
|
|
Sequences
Nucleotide sequence (GC-content: 43.8 %):
ATGTATTCAAAAGCAGATAAAAAACGGGCCATCGAGCTCTTCTATCAATATCACCATTCATGGAGTGCAGTGGTTAGAGAATTGGGTTATCCATCTTTAGGCGCATTGAAGCGATGGATTAAAGATTACGAACAAGACGCCAAAGCCGCGCTTGGTGACACTCCACGAAAGAGAAAACCGAAGTACTCCAATGAACAACGACAAGCAGCAGTGGATCACTTCTTTGAACACGGACAATTCATCACAAAGACAGTCAAAGCGCTTGGTTACCCGTCGCGACAGCTTCTCCGCGAGTGGTTATTAGCAGATCCTCGTTGTGATACTTCATTAAGGAACCGTACGGTTGTGGCTAAGCCCACCACGCCGGATGATGTTAAAGTCAAAGCTGTAGAAGCACTCTATAAACGAGCAGTCCCTGCCAAAAAAATTGCGAATGAATTTGGGGTTAGCCGCGAAACACTCTACGGTTGGAAGCAAGATATACTCGGTGAAAGCTTCCCAGCTAAACAGACGCCTAGTTCATCAGGTGATGAAAAGAATCGAGAAAACTTCACTCCAGAAGTTTCAGATCTCCAAGCTCGTATTAAAGAGCTTGAGCTTCAAAACGACATTCTCCTGCAGGTGAATGCCCTCCTAAAAAAAGATCTGGGCATCAACCAACTCAATCTGACTAACCGAGAAAAGGTTCAGGTGATTGATGCCCTGCGTGATAGATATCTGCTTAATACGCTACTCAAGGCTCTTCAATTATCCAAAAGCAGCTACTTTTATCAACGTGATGCCATCGCCAAAGGCGATAAATATAAAGCAGTACGTCCACGTTTGAAAATCATCTTTAAGCAAAATTACAAAAGCTATGGGTACCGTCGAATGAAGATGGAGCTCGATGATGAAGGGATCCAACTTTCTGAGAAGGTGATTCGCCGGTTGATGGCTGAAGAAGGATTAGAAGTTACCACCACACGTTGTCGAAAATACAGCTCGTACGCGGGTGAAATCACGCCGGCTGTGCCAAACATACTTGATCGGGATTTTCAATCAGACGTCCCAAACCAAAAGCTGGTAACAGATATTACAGAGTTTTCTATCCAAGCCGGAAAAGTATATCTATCACCACTCATTGATTGCTTTGATGGTCAAATCACGAGTTGGACTATCAGTACTAGTCCAAACGCAGAGCTTGTCAATACAATGCTTAGCGTAGCGGCCGAAAGATTACCTTCCAATGAAAAAATCATCGTGCATTCCGATCGAGGCGCTCATTACCGCTGGCCAGGTTGGATTGGGCTAATGGACAAGTTTGGCTTTACACGATCAATGTCGCAGAAAGGCAGCACTCCAGATAATGCACAAGCAGAGAGCTTCTTTGGTCATCTCAAGACGGAGTTCTTTTACAATCGAAGTTGGATTGGAAAGTCAATTGATGATTTCATACAAGCACTTAATGAATATATTGGGTGGTATAACACCAAGAGAAGAAAAAAAGTTTTAGGAGGAAAGAGCCCACAAAAATACCGTCAGAGCAAGATAGCTTGA
Protein sequence:
MYSKADKKRAIELFYQYHHSWSAVVRELGYPSLGALKRWIKDYEQDAKAALGDTPRKRKPKYSNEQRQAAVDHFFEHGQFITKTVKALGYPSRQLLREWLLADPRCDTSLRNRTVVAKPTTPDDVKVKAVEALYKRAVPAKKIANEFGVSRETLYGWKQDILGESFPAKQTPSSSGDEKNRENFTPEVSDLQARIKELELQNDILLQVNALLKKDLGINQLNLTNREKVQVIDALRDRYLLNTLLKALQLSKSSYFYQRDAIAKGDKYKAVRPRLKIIFKQNYKSYGYRRMKMELDDEGIQLSEKVIRRLMAEEGLEVTTTRCRKYSSYAGEITPAVPNILDRDFQSDVPNQKLVTDITEFSIQAGKVYLSPLIDCFDGQITSWTISTSPNAELVNTMLSVAAERLPSNEKIIVHSDRGAHYRWPGWIGLMDKFGFTRSMSQKGSTPDNAQAESFFGHLKTEFFYNRSWIGKSIDDFIQALNEYIGWYNTKRRKKVLGGKSPQKYRQSKIA
GenBank Info
locus_tag - FAM19471-i1-1.1_000643
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011674462.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS3 family transposase
protein_id - extdb:FAM19471-i1-1.1_000643
Gene Locus
Located on scaffold FAM19471-i1-1_scf8
FAM19471-i1-1.1_000642
