locus tag:
FAM19471-i1-1.1_000651
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
site-specific integrase |
|
|
|
Ortholog
|
N0.HOG0000448 |
site-specific integrase |
|
|
Eggnog Protein
|
EP:int3 |
|
|
|
Eggnog Ortholog
|
EO:COG0582 |
|
|
|
Eggnog Description
|
ED:Belongs to the 'phage' integrase family |
|
|
Sequences
Nucleotide sequence (GC-content: 43.8 %):
ATGGCGCAAATCATTAAAAAAGGGCCATCATGGATGGTGCGTGTCAGCATCATGGGAGATGATGGCAAACAACATAAAAAATCAAAGGCCGGCTTTAAGACTAAAGCGGCAGCTAAGGCTTATGCTGCCAAAATGGAGTTTCAAAAAGCAACTGGTGGTGTAGCACTGGTGTCTGGGACGATGTTTCCCGACTACTTTAAAGACTGGTTTAATCTGTATAAACGGTCAAACGTCACCGAAAGAACGGCGTTGACCTATCATCAGGTCTACAACGCACTCAAACAGTATCTCAACGTACCTGTGGAAGATATCGACCGCAGACGCTATCGTCAGTTTATGGTTGATTTTGGCTCAAATCGTGCCAAATCAACCGTCTCAAAATTTAACTCGCTGATCCATGCCTGCGTCAAGGACGCTATGTATGACGGGGTTGTCCACAAAGATTTTGTTGCGTCAACCAACTTGGTTTTTGATAAAAGCAAGACCCGTGAAGTTGACTACCTGTCTATCGATGAGATTCAAAAACTGGTTAGCCATCTCGTTAAAACTCGTAACGTGCACTTTACATCGAAATACATGATACTGACTGCCATTTATACCGGAGCCCGTCTCGGTGAGATCCAGGCTTTGACGTGGGGTGACATAAAAAATAACACGATCAGCATTAACAAGTCTTGGAACGAAACCACACAGGACTTTCAGCCGACTAAAAATGAGTCATCAATCCGCACGATTAATGTGGACGATCAACTGATTGCATTGCTAAAAGAGTTGAATTTTAACAAAAAGCAGATCTTTGTCAGCCAGTATCATACCGTGCCCACCTCTGCAGCAGTCAACAAGACGCTGCGAGAGTCACTTAAAGCATGCCATATCAACCGACGTGGCTTTCATTTTCACAGTCTCAGACACAGCCACGTGGCTTTCTTACTGGCCAACGGGATTGACTTGTATGCTATCAGCAAGCGGCTGGGTCATTCTGACATCACTACCACATCGCGAGTGTACTCATATATGATTGATGAGTACAAAAATTTAACTAACAATCAAATCATCAAAGCGTTAGGAAAATTGTCGAGTGTCTAG
Protein sequence:
MAQIIKKGPSWMVRVSIMGDDGKQHKKSKAGFKTKAAAKAYAAKMEFQKATGGVALVSGTMFPDYFKDWFNLYKRSNVTERTALTYHQVYNALKQYLNVPVEDIDRRRYRQFMVDFGSNRAKSTVSKFNSLIHACVKDAMYDGVVHKDFVASTNLVFDKSKTREVDYLSIDEIQKLVSHLVKTRNVHFTSKYMILTAIYTGARLGEIQALTWGDIKNNTISINKSWNETTQDFQPTKNESSIRTINVDDQLIALLKELNFNKKQIFVSQYHTVPTSAAVNKTLRESLKACHINRRGFHFHSLRHSHVAFLLANGIDLYAISKRLGHSDITTTSRVYSYMIDEYKNLTNNQIIKALGKLSSV
GenBank Info
locus_tag - FAM19471-i1-1.1_000651
inference - COORDINATES: similar to AA sequence:RefSeq:WP_005917311.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - site-specific integrase
protein_id - extdb:FAM19471-i1-1.1_000651
Gene Locus
Located on scaffold FAM19471-i1-1_scf8
FAM19471-i1-1.1_000650
