locus tag:
FAM19471-i1-1.1_000690
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0003342 |
helix-turn-helix transcriptional regulator |
|
|
Gene Product
|
helix-turn-helix transcriptional regulator |
|
|
|
Eggnog Ortholog
|
EO:COG1476 |
|
|
|
Eggnog Description
|
ED:Helix-turn-helix XRE-family like proteins |
|
|
Sequences
Nucleotide sequence (GC-content: 49.1 %):
ATGCGATTAAAGGGAGAAGTTTTAAAACAGGTACGCCGTAAGCGGGGATTGTCCCAAACGGCGTTGGCCGAGGGAATTTGTACCCAAGCGACCATTTCCTTAATGGAAAAGCAAAACCGGATTCCAAAGATGAATATTTTAACGTCTTTGTGTGCCCGCTTGGACATTCCGGTGGACCGGATCATCGAAAACGATGACGTTTCAATGACGGTCTTCTTTGATCAAATCAGTTTGATGTTAGTCAACCATGAATTTGAAGGAGCCCGCAAGAAGCTGAACCGGGTGAAGGTCAAGAAGCTACAAAATGATTTTGACAAGCAACACTACTACTACCTCTTGGGGATGCTCCAAGTGGCGAGTGACCAAGTGGATGATGCCATCTTTAACTTTGAGCTGATTTTGACGCAATTCTCCACCACCAGTGCCAACATCTACTTGGCCATGACCACGATCGGGATGGCCTTGGCATACGAGAAGCGCGGTGACACCGAAAAGGCGCTCCAGTTTGTCGGGCGGGCAATCCACCTGATCGATGACAAGCAGCTTAACGGTGGTAAGCGGCAATGGATCATCTTGTACCACGAGATTTCCGGCCTGTACTATCGTTTAGGCCAGTACCGGCGGGCAATTTCAATGGCTGGACGGGGAATTAAGATCTGCCGGGAAGAGCAAACACTCTTCTTATTGGGTGGTCTTTACATGACCCGTGGCCAGGCGCAAGCTAAGTTAGGCCAGGGCGACGTGGCCCAGGAAAGCTTAACCGTCGCCCTTTCAATCTACAAGATCATGGAAGACGACACCGCACAAGAGACGCTCTCACAAGAATTGAGTCAATTAGTTGAATAA
Protein sequence:
MRLKGEVLKQVRRKRGLSQTALAEGICTQATISLMEKQNRIPKMNILTSLCARLDIPVDRIIENDDVSMTVFFDQISLMLVNHEFEGARKKLNRVKVKKLQNDFDKQHYYYLLGMLQVASDQVDDAIFNFELILTQFSTTSANIYLAMTTIGMALAYEKRGDTEKALQFVGRAIHLIDDKQLNGGKRQWIILYHEISGLYYRLGQYRRAISMAGRGIKICREEQTLFLLGGLYMTRGQAQAKLGQGDVAQESLTVALSIYKIMEDDTAQETLSQELSQLVE
GenBank Info
locus_tag - FAM19471-i1-1.1_000690
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638693.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - helix-turn-helix transcriptional regulator
protein_id - extdb:FAM19471-i1-1.1_000690
Gene Locus
Located on scaffold FAM19471-i1-1_scf9
FAM19471-i1-1.1_000689
