update range to 10000 bp
locus tag: FAM19471-i1-1.1_000701 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001157 F0F1 ATP synthase subunit beta
KEGG gene
 K02112 ATPF1B, atpD; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] kornec00190kornec00195kornec01100
Gene Product
 F0F1 ATP synthase subunit beta
Eggnog Protein
 EP:atpD
Eggnog Ortholog
 EO:COG0055
Eggnog Description
 ED:Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EC Number
 EC:7.1.2.2 H+-transporting two-sector ATPase; ATP synthase; F1-ATPase; FoF1-ATPase; H+-transporting ATPase; mitochondrial ATPase; coupling factors (Fo, F1 and CF1); chloroplast ATPase; bacterial Ca2+/Mg2+ ATPase kornec00190kornec00195kornec01100
EC Number
 EC:3.6.3.14 Transferred to 7.1.2.2
Gene Code
 atpD

Occurs in the following pathway maps:

Pathway Description
kornec00190 Oxidative phosphorylation
kornec00195 Photosynthesis
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 54.1 %):

ATGAGTACTACTGGTAAAGTTGTTCAAGTAATTGGACCAGTTGTTGATATTGAGTTTCCCTTGGACGAGAAGTTACCTGAAATCAACACTGCTTTAAAGATCCAAGAAGCCGATGACAAGACGTTGACGGTCGAAGTTGCCCTTGAACTGGGTGACGGCGTGGTCCGGACGATTGCCATGGACGGGACGGACGGTTTGAAGCGGGGGATGGCTGTCGAAAACACCGACGCCTCCATCAGTGTACCAGTGGGTGACGACACCCTCGGTCGGGTCTTTAACGTCTTAGGGGAACCCGTTGATAACGGACCGGAATTTGGTCCGGACGCACAGCGGATGCCAATCCACCGCGATGCACCAAAGTATGAAGACTTGAGTAACACGACGGAAGTGTTGGAAACGGGGATTAAGGTGATTGACCTCCTCGCCCCATACGTTCGTGGTGGTAAGATTGGTCTCTTCGGTGGTGCCGGGGTTGGGAAGACCGTTTTGATTCAGGAATTAATCCATAACATTGCCCAAGGGCACAACGGGATTTCCGTCTTCACGGGGGTTGGTGAACGAACCCGTGAAGGGAACGACATGTACTACGAAATGAAGGCTTCCGGGGTTTTGGAAAAGACGGCCATGGTTTATGGTCAGATGAACGAACCACCGGGTGCCCGGATGCGGGTGGCCCTGACCGGGCTGACGATTGCCGAATACTTCCGGGATGTTAAGGGTCAAGACGTGTTGCTCTTTATCGACAACATCTTCCGCTTCACCCAGGCCGGTTCAGAAGTTTCCGCCCTCTTAGGTCGGATTCCTTCCGCCGTTGGTTATCAACCAACCCTGGCCACTGAAATGGGTCAACTCCAGGAACGGATTACGTCAACGAAGAAGGGTTCCATTACCTCAATCCAAGCCGTTTACGTTCCGGCCGATGACTACACCGACCCGGCGCCGGCTACGACCTTCGCCCACTTGGACGCCACGACCAACTTGGAACGGCGCCTGACCCAGATTGGGATCTACCCGGCGGTGGACCCACTGGCTTCAACTTCGACGGCCTTAACGCCAGAAGTGGTAGGGCAAGAACACTACGAAGTGGCAACTGGGGTTCAACACGTTCTCCAGCGCTACCGTGAATTACAAGACATCATCTCGATCTTAGGGATGGACGAACTCTCCGATGAAGAAAAGACCATCGTGGCCCGTGCCCGGCGGATTCAAAACTTCTTATCCCAGAGTTTCGCCGTTGCCGAACAATTTACTGGTCAACCGGGGGCTTACGTGCCGCTGGAAGAAACGGTGAAGGACTTCAAGGCCATCCTCGATGGGGAATACGACGACCTGCCGGAAGAAGCCTTCCGTTTGGTCGGCGGGATTGACGAAGCTGTTGCCAAGGCAAAGAAGATGCAGGCGGATACGGCAGCTGAAGGTTAG

Protein sequence:

MSTTGKVVQVIGPVVDIEFPLDEKLPEINTALKIQEADDKTLTVEVALELGDGVVRTIAMDGTDGLKRGMAVENTDASISVPVGDDTLGRVFNVLGEPVDNGPEFGPDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERITSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLASTSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISILGMDELSDEEKTIVARARRIQNFLSQSFAVAEQFTGQPGAYVPLEETVKDFKAILDGEYDDLPEEAFRLVGGIDEAVAKAKKMQADTAAEG

GenBank Info

gene - atpD
locus_tag - FAM19471-i1-1.1_000701
EC_number - 7.1.2.2
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682746.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - F0F1 ATP synthase subunit beta
protein_id - extdb:FAM19471-i1-1.1_000701

Gene Locus

Located on scaffold FAM19471-i1-1_scf9

FAM19471-i1-1.1_000700
FAM19471-i1-1.1_000702