update range to 10000 bp
locus tag: FAM19471-i1-1.1_000731 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R00443 UTP:RNA uridylyltransferase; UTP + RNA <=> Diphosphate + RNA
KEGG reaction
 R00442 CTP:RNA cytidylyltransferase (DNA-directed); CTP:RNA cytidylyltransferase (RNA-directed); CTP + RNA <=> Diphosphate + RNA
KEGG reaction
 R00441 GTP:RNA guanylyltransferase (DNA-directed); GTP:RNA guanylyltransferase (RNA-directed); GTP + RNA <=> Diphosphate + RNA
KEGG reaction
 R00435 ATP:polynucleotide adenylyltransferase; ATP:RNA adenylyltransferase; ATP + RNA <=> Diphosphate + RNA
Ortholog
 N0.HOG0003501 DNA-directed RNA polymerase subunit delta
KEGG gene
 K03048 rpoE; DNA-directed RNA polymerase subunit delta kornec03020
Eggnog Protein
 EP:rpoE
Eggnog Ortholog
 EO:COG3343
Eggnog Description
 ED:Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit
Gene Product
 DNA-directed RNA polymerase subunit delta

Occurs in the following pathway maps:

Pathway Description
kornec03020 RNA polymerase

Sequences

Nucleotide sequence (GC-content: 48.3 %):

TTGGATTTAAAGGTTTTCGATGGCCAGGAAAAATCAGAACTTTCAATGATCGAAGTGGCTCACGCAATCTTAGCTTACCATAATGAGGCAATGGCGTTTGCCGACTTGACCAACGAGATTCAACAATACCTTGGTAAAAGTGACGAGGAAATTCGGGAACGACTCTCGCAGTTTTACACGGACCTGAACGTCGATGGCAGCTTTATTTCCCTTGGTGATAACACCTGGGGCCTGCGTGCCTGGTACCCGTACGAATCGATCGATGAAGCAACGGTTGGTGAAACCGAAGACGAAGAAGATCGGCCAAAGAAGCGCCGGCGCAAGGTCAATGCCTTCTTGGCAGGAACTGACGACGACGACGATGTGATCGACTACGACAACGATGATCCAGAAGATGAAGATCTGGATGATGATCAAGGTCCAGACGATGACGACGATTACGAAGAAGACGACTACGATGAGGATAACCCCGTTGAAGATGATGACGAGGAAACCAACATCGAAGATCAACTGTCTGAGCTTCACGGCGACGAATTCGGCGACGATGAAGAAGAGGACGAAGAAGATAAAGAAGACGACGAGGAATAA

Protein sequence:

MDLKVFDGQEKSELSMIEVAHAILAYHNEAMAFADLTNEIQQYLGKSDEEIRERLSQFYTDLNVDGSFISLGDNTWGLRAWYPYESIDEATVGETEDEEDRPKKRRRKVNAFLAGTDDDDDVIDYDNDDPEDEDLDDDQGPDDDDDYEEDDYDEDNPVEDDDEETNIEDQLSELHGDEFGDDEEEDEEDKEDDEE

GenBank Info

locus_tag - FAM19471-i1-1.1_000731
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003684002.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DNA-directed RNA polymerase subunit delta
protein_id - extdb:FAM19471-i1-1.1_000731

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

FAM19471-i1-1.1_000730
FAM19471-i1-1.1_000732