update range to 10000 bp
locus tag: FAM19471-i1-1.1_000758 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG gene
 K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-] kornec02024kornec02025
Gene Product
 hypothetical protein
Eggnog Protein
 EP:phaG
Eggnog Ortholog
 EO:COG2267
Eggnog Description
 ED:carboxylic ester hydrolase activity

Occurs in the following pathway maps:

Pathway Description
kornec02024 Quorum sensing
kornec02025 Biofilm formation - Pseudomonas aeruginosa

Sequences

Nucleotide sequence (GC-content: 60.3 %):

ATGGGAACTGTAATTATTTTACCGGAGCTGGGGCAGGCCACGGCGGCCTGGCAGGACTTAGTGGTGGGCCACCGCCAAAAGCAGGTGGTTGATTACGAACCGCTCTTAGAAGGGGCGCCGGAATTTGAAGAACTAAGTGCCCAAATAACGGCGCTGGTGCGCGCGGCCGAACAGCCGGTCACCTTGGTGGGCAACGGCTTTGGGGCATTGGTGGGTCTGCGGGTAGCCGCTAGCCAATCGGGGCGCATTGACCGCCTCTTGTTGGTGGCCCCCAACTACCACTTAACGGCCGACCTGACCGTCAGGGCGCTGCCATCGTTATTTACCCCCAAACCGGTCAAACAGTTCCTACGCTCCTTAAACGGGACCACCCTGGCCAAGTGGTTAACCACCGTCCAGTGCCGGGTGAGCGTGATCGCCAGCGACCGCGACCGGGTGGCCAGGGACCTCGACTTACGGTTAGTCGACAGCCACTTTGTTCCCGTTAGCTTGCGCAAGGGGCTCAGTGAAGAGACCCTGGCGGCGATTGAAGATGAGTTGGCCTAG

Protein sequence:

MGTVIILPELGQATAAWQDLVVGHRQKQVVDYEPLLEGAPEFEELSAQITALVRAAEQPVTLVGNGFGALVGLRVAASQSGRIDRLLLVAPNYHLTADLTVRALPSLFTPKPVKQFLRSLNGTTLAKWLTTVQCRVSVIASDRDRVARDLDLRLVDSHFVPVSLRKGLSEETLAAIEDELA

GenBank Info

locus_tag - FAM19471-i1-1.1_000758
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003683963.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - hypothetical protein
protein_id - extdb:FAM19471-i1-1.1_000758

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

FAM19471-i1-1.1_000757
FAM19471-i1-1.1_000759