update range to 10000 bp
locus tag: FAM19471-i1-1.1_000767 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 rihA
Gene Product
 pyrimidine-specific ribonucleoside hydrolase RihA
Ortholog
 N0.HOG0000948 nucleoside hydrolase
KEGG gene
 K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
Eggnog Protein
 EP:rihA
Eggnog Ortholog
 EO:COG1957
Eggnog Description
 ED:Inosine-uridine preferring nucleoside hydrolase
EC Number
 EC:3.2.2.3 uridine nucleosidase; uridine hydrolase kornec00240kornec00760kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00240 Pyrimidine metabolism
kornec00760 Nicotinate and nicotinamide metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 58.5 %):

ATGGTAAAGAAGATCATTTTAGACTGCGACCCGGGCCACGATGACGCCTTAGCGATGACCTTAGCTGTTGCCAACCCGGCGATTGACCTGGTGGCGGTGACGACGTCGGCGGGTAACCAAACCCCGGATAAGACCTTGAACAACGCCCTGCGAATGCTGACGATCTTAAAGCGCCCTGACATCCCGGTGGCCGCCGGGGCCCAGGTCCCGCTGGTCAAACCACTAGAAACGGCGCCCGAAGTTCACGGCGAAACCGGCCTGGACGGGGCCGACCTGCCGGAGCCGGGCTTTTTGCCCCAAAGCCTGCCGGCGATCGAGTTAATGGCGCGGGTCCTGCAAGAAAGTACGGAAAAGGTGACCCTGGTCGTGACCGGGCCGATGACCAATGCCGCCCTGTTTTTGCGGACCTGCCCGGACCTGGCTAGGGAAAAAATTGACCAAATCGTCTTCATGGGCGGGGCAATGGGGTTGGGTAACTGGCAACCCAGCGTCGAGTTCAACATCTTCGTCGACCCCGAGGCAGCCAAGATCGTGCTGAACTTTGGCCTGCCGCTGGTGATGGTACCCCTAAACGTCACCCACCAGGCCCAGATCACCAAGCCAGAAATTGACGAAATCGCCCAGCTGGATAACCCGGTGGCCCAGGCCTTTGTGGGCTTGTTGAACTTCTTTGAACGTTACCACGAGGATCCGAAGTGGGGCTTTGTCGGCGCCCCGCTCCACGACCCCTGCACGATTGCCTGGTTGATTAATCCGGCCCTGTTTGACGGTGTGGATGTCAACGTCGACGTGGAGACGACCGGGGAGTTAACCCGGGGCGAAACGGTTTGCGATTACTACCACCTAACCGGCAAGCCGGTTAACACCAAGTTACTCCTTAAGGTTGACCGGGCCGGCTTTATTTCCCTAGTCAAAGAATCGCTAGCCAGTTTTGGTTAG

Protein sequence:

MVKKIILDCDPGHDDALAMTLAVANPAIDLVAVTTSAGNQTPDKTLNNALRMLTILKRPDIPVAAGAQVPLVKPLETAPEVHGETGLDGADLPEPGFLPQSLPAIELMARVLQESTEKVTLVVTGPMTNAALFLRTCPDLAREKIDQIVFMGGAMGLGNWQPSVEFNIFVDPEAAKIVLNFGLPLVMVPLNVTHQAQITKPEIDEIAQLDNPVAQAFVGLLNFFERYHEDPKWGFVGAPLHDPCTIAWLINPALFDGVDVNVDVETTGELTRGETVCDYYHLTGKPVNTKLLLKVDRAGFISLVKESLASFG

GenBank Info

gene - rihA
locus_tag - FAM19471-i1-1.1_000767
EC_number - 3.2.2.3
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686408.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - pyrimidine-specific ribonucleoside hydrolase RihA
protein_id - extdb:FAM19471-i1-1.1_000767

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

FAM19471-i1-1.1_000766
FAM19471-i1-1.1_000768