update range to 10000 bp
locus tag: FAM19471-i1-1.1_000798 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 rRNA pseudouridine synthase
Ortholog
 N0.HOG0000743 rRNA pseudouridine synthase
KEGG gene
 K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Eggnog Protein
 EP:rluB
Eggnog Ortholog
 EO:COG1187
Eggnog Description
 ED:Belongs to the pseudouridine synthase RsuA family
EC Number
 EC:5.4.99.22 23S rRNA pseudouridine2605 synthase; RluB; YciL

Sequences

Nucleotide sequence (GC-content: 54.7 %):

ATGGCAAAAGAACGTCTGCAAAAGGTGATCGCCCACGCCGGGGTTGCCTCCAGAAGGGCTGCGGAGGGCCTAATTCTCGCCGGCAAGGTGAAGGTCAATGGCCAGGTAGTAACCGAGCTGGGGACCAAAGTTGATGGCAACGATGAGGTGATGGTCAACGGCGAACCGGTCGAACAAGAGCAACACGAGTACTATTTGCTCGATAAGCCACGCGGGGTCATTTCTTCGGCCCACGATGATAAGGGGCGCAAGACGGTGGTCGATATCTTAAAAAACGAAGGGGTGCAAACGCGGGTCTACCCGGTGGGGCGCCTCGATTACGACACCACCGGCCTCTTGGTGATGACTAACGACGGGGAATTAGCCAACCGGTTAATGCACCCCCGCTTTGAAGTCGATAAGGTCTACATCGCCAAGGTCAAAGGCCTCGTTTCAAACGATGAGATGCGGCTGCTCCGCGAAGGGGTTAAAATTGATGGCAAAAAGAGCCAACCGGCCCGGACCAAACTACTCGAAGCAAACCAACGCCAAAAGACCTCGGTGGTTAAGTTAACCATTCACGAGGGTCACTACCATCAGGTTAAAAAGATGATGGAAGCGGTCGGCCACCCCGTGCTTAAGTTGCACCGGGAAAGTTATGGACCGCTGACTCTAGCTGGGCTCAATCCAGGCCAGTTCCGCAAGCTCAAGGTCGATGAGGTGCGGGCCCTACGCAAGTTGTATTAA

Protein sequence:

MAKERLQKVIAHAGVASRRAAEGLILAGKVKVNGQVVTELGTKVDGNDEVMVNGEPVEQEQHEYYLLDKPRGVISSAHDDKGRKTVVDILKNEGVQTRVYPVGRLDYDTTGLLVMTNDGELANRLMHPRFEVDKVYIAKVKGLVSNDEMRLLREGVKIDGKKSQPARTKLLEANQRQKTSVVKLTIHEGHYHQVKKMMEAVGHPVLKLHRESYGPLTLAGLNPGQFRKLKVDEVRALRKLY

GenBank Info

locus_tag - FAM19471-i1-1.1_000798
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003684943.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - rRNA pseudouridine synthase
protein_id - extdb:FAM19471-i1-1.1_000798

Gene Locus

Located on scaffold FAM19471-i1-1_scf11

FAM19471-i1-1.1_000797
FAM19471-i1-1.1_000799