locus tag:
FAM19471-i1-1.1_000802
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
tyrosine-type recombinase/integrase |
|
|
|
Ortholog
|
N0.HOG0000340 |
tyrosine recombinase XerS |
|
|
KEGG gene
|
K04763 |
xerD; integrase/recombinase XerD |
|
|
Eggnog Protein
|
EP:xerD |
|
|
|
Eggnog Ortholog
|
EO:COG4974 |
|
|
|
Eggnog Description
|
ED:recombinase XerD |
|
|
Sequences
Nucleotide sequence (GC-content: 58.7 %):
ATGAATAAGGGGTCAGACGCCCTGCAAGCTTCACTAGTCAGCTACCAGGAGTGGTTGACTAAAAAGGGGGGCGCCAAGTTGACCATCGCCAGTTACTTGACGGATCTGCGGGATACGGCCGCCTATTTAACCAGTCGGGGGGTCACTAATTGGCAGCAAGTGGACCGGGCTACTTTAACGGCGTACTTACAATCGTTAAACGATAAGGGCCGGCGAACAACGACGATTCAGCGCCGGATTAGCAGCCTACGTCGCTTTTATGCGTACTTACAGGTGACGGGGCAGGTCAACCACGATCCGGTCGCCTTGCTGAAGGCTAAGCAAACGCCCCGGTTGGCCCCGGTCGGGTTAACGCCGCAAGAGGCGGATTTGCTACCTGATCACGTCCCGGGCAAGGGGGTGGCTAGGGAACGCAACCGCGCCTTAGTTGCACTCTTGGTGGCGACCGGGGCGCGGGCTAACGAACTTCGGGACCTGCAAACGGGTGACCTCGACCTGGAACTGGGGGTCGTCTACCTGGGGCAGTCCTCCCGGCGCTTGGTCCCGCTCAACGAACAGGCCCAAACGTACTTGACGACCTACTTAACCGCCAGGGCCGACCAGTCGGCGACCGATGAGGGATACGTCTTTTTAAATAACCGGGGCCAGCCCCTATCGCGCCAGTCAATCTGGGAGATTGTGAACGCAACTGGGCAGCGGACCAACATTGAGGGGGCCGTAACCCCCCAGCGGGTCCGGGATGGCTTTGCCTACCGCCTGCTAGCCCACGGTGCTGATTTAAGCCTTGTTCAGCAACTGATGGGGCACCAAAGCATCCTGACGACCCAAGTGTACTTAGAGCAAGCAAAGGAGGGGCACCATGCTGATCGCTTACCGTAA
Protein sequence:
MNKGSDALQASLVSYQEWLTKKGGAKLTIASYLTDLRDTAAYLTSRGVTNWQQVDRATLTAYLQSLNDKGRRTTTIQRRISSLRRFYAYLQVTGQVNHDPVALLKAKQTPRLAPVGLTPQEADLLPDHVPGKGVARERNRALVALLVATGARANELRDLQTGDLDLELGVVYLGQSSRRLVPLNEQAQTYLTTYLTARADQSATDEGYVFLNNRGQPLSRQSIWEIVNATGQRTNIEGAVTPQRVRDGFAYRLLAHGADLSLVQQLMGHQSILTTQVYLEQAKEGHHADRLP
GenBank Info
locus_tag - FAM19471-i1-1.1_000802
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391190.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - tyrosine-type recombinase/integrase
protein_id - extdb:FAM19471-i1-1.1_000802
Gene Locus
Located on scaffold FAM19471-i1-1_scf11
FAM19471-i1-1.1_000801
