update range to 10000 bp
locus tag: FAM19471-i1-1.1_000809 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 tRNA (adenine(22)-N(1))-methyltransferase TrmK
Ortholog
 N0.HOG0003438 tRNA (adenine-N(1))-methyltransferase
KEGG gene
 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140101 catalytic activity, acting on a tRNA
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043414 macromolecule methylation
Gene Ontology
 GO:0043412 macromolecule modification
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0034470 ncRNA processing
Gene Ontology
 GO:0032259 methylation
Gene Ontology
 GO:0030488 tRNA methylation
Gene Ontology
 GO:0016741 transferase activity, transferring one-carbon groups
Gene Ontology
 GO:0016740 transferase activity
Gene Ontology
 GO:0016429 tRNA (adenine-N1-)-methyltransferase activity
Gene Ontology
 GO:0016426 tRNA (adenine) methyltransferase activity
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009451 RNA modification
Gene Ontology
 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
Gene Ontology
 GO:0008175 tRNA methyltransferase activity
Gene Ontology
 GO:0008173 RNA methyltransferase activity
Gene Ontology
 GO:0008168 methyltransferase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008033 tRNA processing
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006400 tRNA modification
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006396 RNA processing
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0001510 RNA methylation
Eggnog Protein
 EP:trmK
Eggnog Ortholog
 EO:COG2384
Eggnog Description
 ED:SAM-dependent methyltransferase
EC Number
 EC:2.1.1.217 tRNA (adenine22-N1)-methyltransferase; TrmK; YqfN; Sp1610 (gene name); tRNA: m1A22 methyltransferase

Sequences

Nucleotide sequence (GC-content: 55.7 %):

ATGGATGCACAGAACTTATCAAAGCGCTTAGCCGCCGTGGCAGCACAAGTTCCCAAGGGGAGCCGTCTGGCCGACATTGGGTCCGATCACGCGTACTTGCCAGCCCATTTGTTGATGGCTCAGCAAATCGATTTTGCCGTCGCCGGGGAAGTAGTCGAAGGACCCTTTGAAAACATGCTAAAAGAAGTGGAGCACCGCGGCCTAGCTGACCACTTGCTTCCCCGCCTCGCCAACGGCCTGGACGCAATTCGAAAAGAAGACCGGATTGACACGATTACGATTGCCGGGATGGGGGGGACTTTGATCACCAAGATCTTGGACGCCGGCCAGGAGAAGTTGGAAGGGGTCAAGCGCTTGATCCTCCAGCCAAACGTTGGCGAAGAGGGGTTGCGCCTTTGGTTGGCTAAGCACCACTTTGAAATTATCCACGAAGAGATCCTAGAAGAAGATGACCACGTTTACGAAATCATCGTGGCCACCCCGACGCCTAACCCGGTGGCCTACAACCAACGCGAGGCCCTGTTTGGTCCCCTGTTAATTCAAGCGGGGGGGCCGGTCTTCGTTAAAAAGTGGCAAAAGGAACTAGCCCGGGATCAGTACGCCATCGAGCAAATGCGCAGGGCCAAGGAGGTTCCGGCCGACCGTTTGGCCGCTTACGAAGCCCGGGTGGCGCTAATAAAGGGGGTTTTAGAAGATGACTAA

Protein sequence:

MDAQNLSKRLAAVAAQVPKGSRLADIGSDHAYLPAHLLMAQQIDFAVAGEVVEGPFENMLKEVEHRGLADHLLPRLANGLDAIRKEDRIDTITIAGMGGTLITKILDAGQEKLEGVKRLILQPNVGEEGLRLWLAKHHFEIIHEEILEEDDHVYEIIVATPTPNPVAYNQREALFGPLLIQAGGPVFVKKWQKELARDQYAIEQMRRAKEVPADRLAAYEARVALIKGVLEDD

GenBank Info

locus_tag - FAM19471-i1-1.1_000809
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003683220.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - tRNA (adenine(22)-N(1))-methyltransferase TrmK
protein_id - extdb:FAM19471-i1-1.1_000809

Gene Locus

Located on scaffold FAM19471-i1-1_scf11

FAM19471-i1-1.1_000808
FAM19471-i1-1.1_000810