OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_000845
locus tag:
FAM19471-i1-1.1_000845
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
KEGG reaction
R00378 deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dTTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00377 Deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dCTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00376 Deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dGTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00375 Deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dATP + DNA <=> Diphosphate + DNA
Gene Product
PolC-type DNA polymerase III
Ortholog
N0.HOG0003446 PolC-type DNA polymerase III
KEGG gene
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
kornec03030 kornec03430 kornec03440
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005575 cellular_component
Eggnog Protein
EP:polC
Eggnog Ortholog
EO:COG2176
Eggnog Description
ED:Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EC Number
EC:2.7.7.7 DNA-directed DNA polymerase; DNA polymerase I; DNA polymerase II; DNA polymerase III; DNA polymerase alpha; DNA polymerase beta; DNA polymerase gamma; DNA nucleotidyltransferase (DNA-directed); deoxyribonucleate nucleotidyltransferase; deoxynucleate polymerase; deoxyribonucleic acid duplicase; deoxyribonucleic acid polymerase; deoxyribonucleic duplicase; deoxyribonucleic polymerase; deoxyribonucleic polymerase I; DNA duplicase; DNA nucleotidyltransferase; DNA polymerase; DNA replicase; DNA-dependent DNA polymerase; duplicase; Klenow fragment; sequenase; Taq DNA polymerase; Taq Pol I; Tca DNA polymerase
Occurs in the following pathway maps:
Pathway
Description
kornec03030
DNA replication
kornec03430
Mismatch repair
kornec03440
Homologous recombination
Sequences
Nucleotide sequence (GC-content: 58.0 %):
G T G G C C C T A A G C A A A C A G G A A C A G T T T G A A A A G T T A C T G G A G C A A A T T G A C T A T G C C G A C C C C C A C T T A A C G G G C G G G G C G A T T G A C C A A G T G G T G G T T C A C C A G C A G T C A C G G G T G T G G G A G T T G C A C C T T C A C T T A A G G G A G G T C T T G C C G C T A G C C G T C T T C A C C C A G C T G G A A C A A A A A A C G G C G G T T T C C T T T C A C C A A C T G G C C A A G G C C C A G G T C C G C T T T G A G A T C A C G A C C G A C C A A G G G G A G C T G G T C C C A A A C T T G A T T A G C G A C T A C T G G C C T T A C G T G G T C C G G A T G G T G G C C G G C A A T T C G C C G A T G G C C C A G G A A A T C T G C T T A A A G A C C T C G C C G G A G C T C G A C G A C G G G C G G G T G A G C C T G C T G A T G G A A A A C G A G G C C G T C G A A C A G A T C T T T G C C A C C A A G C T C C T A G G C A A G A T C G A G G A G G G C T A C C A G C A G G T G G G C T T T C C G G C C T T T C A T A T C C A C A C C C T G G T C G A C C A G A G T G C G T C C C A A G C C A A G A T T G A G G A A T T A A A G G C C A A G C A A C A A A A G G C C G A C G A G G A G C T G G T T A A A C A G G C C C G C A C C C A G A T C G A A C A A G C C A A G C A A A A G A A A C A G G C G A C C G C C A G T G C G G C C C C C G A C G G C C C A A T T G T G A T C G G C A G A A A G C T C G G G C C G A A C G A T C A G G T G A C C C G G A T G G C C A C G A T C A C C G A A G A G G A G A G C C A G G T G G T C G T C G A A G G G T A C G T C T T T G C C A A G G A G A T C A A G G A A C T G C G C T C G G A G C G C C A G A T C C T G A T C C T A G A G A T T A C C G A T T A C A C C T C C T C G T T T T C G G T T A A G A T G T T C T C C G A C C G G C G G G G G A C C A A T A A G C C G C T C T T T G C C G C C C T G G A A A A G G G G A T G T G G G T C A A G G T C C G C G G T T C G G T G C A A G A A G A C A C C T A C A T G C G C G A C C T G G T G A T T A A C G C C C G C G A C A T T A A C G A G G T C T C C C A C C A G G A A C G C C A G G A C A C G G C G C C G G C C G A C C A A A A G C G G A T T G A G T T A C A C C T C C A C A C C A C C A T G T C G A C G A T G G A C G C C A C C A A C A C G A T C G G C G A A T A C G T T A A G C A G G C G A T T A A G T G G G G C C A A C C G G C G A T C G C C A T T A C C G A T C A C G C C G G C T T A C A G G G C T T C C C G G A G G C C T T T A G C T C C T C G T A C G A C G G G A A A A A G G A C G A A A G C A A G A T T A A G A T G C T C T A C G G C G T C G A G G C C A A C G T G G T T G A T G A C G G G G T G C C G C T G G T T T A T A A C G A A A A C C A C C T G C C G C T C A A G G G C C A G C C C T A C G T G A T C T T C G A C A T T G A A A C G A C C G G G C T G T C G G C C A T C T A C G A C C G G A T C A T C C A A G T T T C G G C C G T C A A G A T G C A A G A T G G C G A G G T C T T A G A C C A C T T C G A C C A A T T C A T C G A T C C G G G T T T C C A C C T G T C G G A A C A A A C G A C C G C C C T G A C C T C G A T C A C C G A C G A C A T G G T G C A G G G G T C C A A G A C C G A A G A A G A G G T C C T C A A G C T C T T T G A C G A C T T T G C G G A C G G C T C G C T G T T A G C C G G G C A C A A C G T C T C C T T T G A T A T G G G C T T T A T G A A C G T G G C C T A C G A A C G G C A C G G G A T G G G G C A A A T C A A G C A G C C G G T C A T C G A C A C C T T G C C G C T G G C C C G C T T C T T G C A C C C G G A C T T T C G C G G T T A C C G C T T G A A C A C C C T G A G C A A G C G C T T T A A G G T C T C C T T G G A G C A C C A C C A C T T G G C C T C T T A C G A C T C C G A A G C C A C C G G C C A C T T G C T G G C G A T C T T T T T A A A G G A C G C C G A G G A G C G C T A C G G G G T G A C C T A C G T C G A C G A C T T G A A C A A G C A T A T G A C T G A C A A C G G G G C T T A C C G C C A C G C C C G G C C G T T C C A C G T C A C C A T C T T G G C G G C G A C C C A G G C T G G C T T G A A G A A C C T T T A C A A G C T A G T T T C T T T G T C C A A C G T C G A G T A C T T T G C C C G G G T A C C C C G G A T T C C G C G T T C G G T T T T G A A C C G C T A C C G G G A G G G G C T C T T G C T C G G G A C C G C C T G T G C C G A C G G G G A A G T C T T C A C C G C C A T G A T G C A A A A G G G T T A C G G C G A G G C C A A A C G G T T G G C A G A A T T T T A C G A T T A C A T C G A G G T C C A G C C C A A G C C T A A T T A T G C T C C G C T G T T A G A G A G T G G C G T G A T C A C G G A T C A G G C C C A C T T A G A A G A C A T C T T A A A G A A C A T G G T A A A A C T C G G C A G C G C C C T G A A T A A G C C G G T C G T G G C C A C C G G G G A C G C C C A C T A C A T T A A C C C C G A A G A C G C C A T T T A C C G T A A G A T T C T G A T C A A C T C C C A G G G G G G T G C C A A C C C C T T G A A C C G G A C C G A G C G C C C C G A C G T G C A C T T C C G G A C C A C C G A C G A G A T G C T C G A C C T C T T C T C C T T C C T G G G C G A G G A C G T C G C C A A G C A G A T T G T C G T T G A T A A C A C C C A C C T G G T T G C C G A C A T G G T C G A C G A C G G G A T C C G C C C G G T T A A G G C C G G C T T G T A C C C G C C G C A C A T G G A G G G G G C C G A A C A A G A A A T T C A G G A C C G G A C C T G G A C G A C G G C C A A G G A A T G G T A C G G T G A C C C G C T G C C G C A A C T G G T T A A G G A C C G G G T T G A A T T G G A A C T G A A C T C G A T T G T T T C C A A C G G G T T C T C G G T C C A C T A C T T G A T C G C C C A G C G G C T G G T G G C C A A G T C A A C T A A G G A C G G C T A C C T G G T C G G G T C A C G G G G G T C G G T C G G C T C C A G T G T G G T C G C C A C T T T G T C T G G G A T C A C C G A G G T T A A C C C A C T A C C G C C G C A C T A C C G C T G C C C G A A C T G T C A G T A C T C G C A C T T T T A C A C C A A G G G G G A A T A C T C C T C G G G C T T T G A C T T G C C C G A C A A G G A C T G C C C G A A G T G T G G G A C C A A G A T G A T T G G T G A C G G C C A C G A C A T C C C C T T C C A A A C C T T C T T G G G C T T T A A G G G G A A T A A G G T T C C G G A T A T C G A T T T G A A C T T C T C A G G G G A C T A C C A A C C G A T C G C C C A C A A C T A C A T G A A G G T C T T G T T C G G T G A A A A T A A C G T T T A C C G G G C C G G C A C G A T C G G G A C G G T C G C C G A T A A G A C C G C C T A C G G T T A C G T C A A G G C C T A C G A A C G C G A C A A G G A A G T T C A G T T C C G C G G C G C C G A A G A G G A C C G G C T G G C C A G C G G G G C G A C C G G G G T C A A G C G G A C G A C C G G C C A G C A C C C G G C C G G G A T C A T C A T C G T G C C C G A C G A C A T G G A A A T T T A C G A C T T C A C G C C G G T T C A G T A C C C G G C C G A C G A C C A A T C G G C G G C C T G G G A A A C G A C C C A C T T C G A T T T C C A C T C G A T C C A C G A C A A T A T T T T G A A G A T G G A C A T C C T G G G C C A C G A T G A C C C A A C C A T G A T C C G G G C C C T C C A G G A C C T G T C G G G G A T C A A C C C G C A G T C G A T C C C G A T G G A C G A C C C C G G G G T G A T G A G C C T C T T C T C C A G C C C C G A A G C G C T C G G G G T G A C C G A A G A A C A G A T C A A C T C C A A G A C C G G G A C G C T C G G G C T G C C C G A A T T T G G G A C C C G C T T T G T G C G G G G G A T G C T A G A A G A C A C C C A C C C G C A A A A C T A T T C C C A A C T C C T G C A A A T T T C C G G G C T C T C C C A C G G G A C C G G G G T G T G G C T C G A T A A C G C C C A G G A A C T G A T T A A A A A C G G C A C C G C C A C G A T T G C C A A C G T G A T C G G G T G C C G G G A T A A C A T C A T G A C C G A C T T G A T C C A C T A C G G G T T G G A T T C G G A A A C C T C T T T C C A G G T C A T G G A A C A C G T C C G T A A G G G A A A G G G G A T C C C C G A A G A G T G G C A A G A G A A G A T G A C C G A A G T C G G C G T G C C G C A G T G G T A C C T C G A C T C G T G T T T G A A G A T C A A G T A C A T G T T C C C G C G G G C C C A C G C G G C C G C C T A T G T C T T G A T G G C C C T G C G G A T T G C C T A C T T T A A G G T C T A C T T C C C G C T G G T T T A C T A C G C C G C C T T C T T C T C G G T G C G G G C C G A T G A C T T T G A C G T C G T C G C C A T G A G C C A C G G C A A G G A A G C C G T T A A G T C A G C G A T G C A A G C A A T T A C C A G C A A G G G C A A C G A A G C C A C G G C C A A G G A A A A G T C A C T G C T G A C G A T C C T G G A G C T G G C T A A C G A A A T G C T G G A G C G G G G C T T T A A G T T T A A G A T G G T C G A C A T C G A A C G C T C C G A C G C C A C C G A C T G G T T A A T T G A T G G C G A C A C C C T G A T T G C G C C G T T C C G G G C G A T C C C G G G G C T C G G G A T C A A C G T G G C C A A G C A G A T C G T G G C C G C C C G G G A G G A A A A G C C C T T C T T G T C C A A G C A A G A C C T C T C C G A A C G G G G G A A G G T C T C C A A G A C C T T G A T C G A G T T T A T G A C C G T C A A C C A C G T C C T A G A C C A A C T C C C A G A C G A A A A C C A G C T G T C C T T G T T T G A C A T G C T G T A A
Protein sequence:
M A L S K Q E Q F E K L L E Q I D Y A D P H L T G G A I D Q V V V H Q Q S R V W E L H L H L R E V L P L A V F T Q L E Q K T A V S F H Q L A K A Q V R F E I T T D Q G E L V P N L I S D Y W P Y V V R M V A G N S P M A Q E I C L K T S P E L D D G R V S L L M E N E A V E Q I F A T K L L G K I E E G Y Q Q V G F P A F H I H T L V D Q S A S Q A K I E E L K A K Q Q K A D E E L V K Q A R T Q I E Q A K Q K K Q A T A S A A P D G P I V I G R K L G P N D Q V T R M A T I T E E E S Q V V V E G Y V F A K E I K E L R S E R Q I L I L E I T D Y T S S F S V K M F S D R R G T N K P L F A A L E K G M W V K V R G S V Q E D T Y M R D L V I N A R D I N E V S H Q E R Q D T A P A D Q K R I E L H L H T T M S T M D A T N T I G E Y V K Q A I K W G Q P A I A I T D H A G L Q G F P E A F S S S Y D G K K D E S K I K M L Y G V E A N V V D D G V P L V Y N E N H L P L K G Q P Y V I F D I E T T G L S A I Y D R I I Q V S A V K M Q D G E V L D H F D Q F I D P G F H L S E Q T T A L T S I T D D M V Q G S K T E E E V L K L F D D F A D G S L L A G H N V S F D M G F M N V A Y E R H G M G Q I K Q P V I D T L P L A R F L H P D F R G Y R L N T L S K R F K V S L E H H H L A S Y D S E A T G H L L A I F L K D A E E R Y G V T Y V D D L N K H M T D N G A Y R H A R P F H V T I L A A T Q A G L K N L Y K L V S L S N V E Y F A R V P R I P R S V L N R Y R E G L L L G T A C A D G E V F T A M M Q K G Y G E A K R L A E F Y D Y I E V Q P K P N Y A P L L E S G V I T D Q A H L E D I L K N M V K L G S A L N K P V V A T G D A H Y I N P E D A I Y R K I L I N S Q G G A N P L N R T E R P D V H F R T T D E M L D L F S F L G E D V A K Q I V V D N T H L V A D M V D D G I R P V K A G L Y P P H M E G A E Q E I Q D R T W T T A K E W Y G D P L P Q L V K D R V E L E L N S I V S N G F S V H Y L I A Q R L V A K S T K D G Y L V G S R G S V G S S V V A T L S G I T E V N P L P P H Y R C P N C Q Y S H F Y T K G E Y S S G F D L P D K D C P K C G T K M I G D G H D I P F Q T F L G F K G N K V P D I D L N F S G D Y Q P I A H N Y M K V L F G E N N V Y R A G T I G T V A D K T A Y G Y V K A Y E R D K E V Q F R G A E E D R L A S G A T G V K R T T G Q H P A G I I I V P D D M E I Y D F T P V Q Y P A D D Q S A A W E T T H F D F H S I H D N I L K M D I L G H D D P T M I R A L Q D L S G I N P Q S I P M D D P G V M S L F S S P E A L G V T E E Q I N S K T G T L G L P E F G T R F V R G M L E D T H P Q N Y S Q L L Q I S G L S H G T G V W L D N A Q E L I K N G T A T I A N V I G C R D N I M T D L I H Y G L D S E T S F Q V M E H V R K G K G I P E E W Q E K M T E V G V P Q W Y L D S C L K I K Y M F P R A H A A A Y V L M A L R I A Y F K V Y F P L V Y Y A A F F S V R A D D F D V V A M S H G K E A V K S A M Q A I T S K G N E A T A K E K S L L T I L E L A N E M L E R G F K F K M V D I E R S D A T D W L I D G D T L I A P F R A I P G L G I N V A K Q I V A A R E E K P F L S K Q D L S E R G K V S K T L I E F M T V N H V L D Q L P D E N Q L S L F D M L
GenBank Info
locus_tag - FAM19471-i1-1.1_000845
Gene Locus
Located on scaffold FAM19471-i1-1_scf12
Cellular location
Responsible annotations:
SL-0229 :
GO:0005622
intracellular anatomical structure
SL-0086 :
GO:0005737
cytoplasm
FAM19471-i1-1.1_000844
