update range to 10000 bp
locus tag: FAM19471-i1-1.1_000853 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 transcription termination/antitermination protein NusA
Gene Code
 nusA
Ortholog
 N0.HOG0001200 transcription termination/antitermination protein NusA
KEGG gene
 K02600 nusA; transcription termination/antitermination protein NusA
Gene Ontology
 GO:2001141 regulation of RNA biosynthetic process
Gene Ontology
 GO:2000112 regulation of cellular macromolecule biosynthetic process
Gene Ontology
 GO:1903506 regulation of nucleic acid-templated transcription
Gene Ontology
 GO:0080090 regulation of primary metabolic process
Gene Ontology
 GO:0065007 biological regulation
Gene Ontology
 GO:0060255 regulation of macromolecule metabolic process
Gene Ontology
 GO:0051252 regulation of RNA metabolic process
Gene Ontology
 GO:0051171 regulation of nitrogen compound metabolic process
Gene Ontology
 GO:0051128 regulation of cellular component organization
Gene Ontology
 GO:0050794 regulation of cellular process
Gene Ontology
 GO:0050789 regulation of biological process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0043244 regulation of protein-containing complex disassembly
Gene Ontology
 GO:0031564 transcription antitermination
Gene Ontology
 GO:0031554 regulation of termination of DNA-templated transcription
Gene Ontology
 GO:0031326 regulation of cellular biosynthetic process
Gene Ontology
 GO:0031323 regulation of cellular metabolic process
Gene Ontology
 GO:0019222 regulation of metabolic process
Gene Ontology
 GO:0019219 regulation of nucleobase-containing compound metabolic process
Gene Ontology
 GO:0010556 regulation of macromolecule biosynthetic process
Gene Ontology
 GO:0010468 regulation of gene expression
Gene Ontology
 GO:0009889 regulation of biosynthetic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006355 regulation of DNA-templated transcription
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:nusA
Eggnog Ortholog
 EO:COG0195
Eggnog Description
 ED:Participates in both transcription termination and antitermination

Sequences

Nucleotide sequence (GC-content: 55.5 %):

ATGAGCAAGAAGGAAGACCGGGTAGAACTACTCGACGCGATGGACATCCTGGAAAAGGAAAAGGGAATCAAAAAAGAGGTCATCATTGAGGCCTTAAAGGACGCCCTGGCCAACGCCTACCAAAAGAATTACGAAGACAACGCGGCCAACGTGGAAGTCGAAATCAGTGACCGGACCGGTGAATTTAAGGTCTACGCCGCTAAGACGGTGGTTGAAGAAGTCACTAACGACGTGGAAGAAATTTCTTTGGCCGACGCATTGCGGGTTAACCGCGGTTACGAACTGGGTGATATCTTCAAAGAAGAAGTGACGCCGCGCAACTTCGGTCGTCTGGCTGCCCAAACCGCCAAGAGCGTGGTGTTGCAAAAGCTACGGGACGAAGAACGAAACATCATCTTTGACAAGTACAACAAGTTAAAGGATGATTTAGTCGAAGGGGAAGTCTCACGAGAAGACGAACGCTACATCTACGTCAACCTCGGTGACGGTGTGGAAGCGGCCATGAACAAGCATGACCAAATGCCAAACGAGCACTACCGGGTGCACGACCGGATCCAAGTTTACGTGACCCGGGTCAACGACAAGAGCGGCGCCCGCGGGCCGTTGGTCTTCGTTTCCCGGACCAGTCCGGACCTGCTCAAGCGGCTCTTTGAAAAGGAAGTGCCGGAAATTCAACAGGGGATCGTGGAAGTTAAGGGGATCGTGCGTGAAGCCGGTGACCGGGCCAAGGTGGCCGTCTTCTCCCGCGACGAAAACGTTGACCCAGTCGGGACTTGCGTGGGACCACGCGGGACCCGGGTTCAGGCGATCGTCAACCAACTGGGCGGCGAAAACATCGACATCGTTAAGTACGAAGAGGCGCCGGAAGAATTTATCCGCAACGCCCTGAACCCGGCCGAAGTCGAAGGGGTGCTCTTCGATGAAAACAACGGGGAAGTCGATGAACCGGCTAGCGTCGACGAAAACGGTCGCAAACACGAGGAACGGATCCACCGTGGTTGCACCGTGATCGTACCGGACGACCAACTGTCACTGGCGATCGGTAAGCGGGGGCAAAACGTTCGCTTAGCCGCACAGCTGACCGGCTACAAGATCGACATCAAGTCGTCATCCCAAGCGGCGGCCCTGGAAGAAGCGCAACCAGAACCAGCAGCAGAAGTTGTAGAGCAGCCAACCCAAGCCCCAGAGCTTGACCAAGCCGCTGACAGCTTCGCAGACGAAGACTAG

Protein sequence:

MSKKEDRVELLDAMDILEKEKGIKKEVIIEALKDALANAYQKNYEDNAANVEVEISDRTGEFKVYAAKTVVEEVTNDVEEISLADALRVNRGYELGDIFKEEVTPRNFGRLAAQTAKSVVLQKLRDEERNIIFDKYNKLKDDLVEGEVSREDERYIYVNLGDGVEAAMNKHDQMPNEHYRVHDRIQVYVTRVNDKSGARGPLVFVSRTSPDLLKRLFEKEVPEIQQGIVEVKGIVREAGDRAKVAVFSRDENVDPVGTCVGPRGTRVQAIVNQLGGENIDIVKYEEAPEEFIRNALNPAEVEGVLFDENNGEVDEPASVDENGRKHEERIHRGCTVIVPDDQLSLAIGKRGQNVRLAAQLTGYKIDIKSSSQAAALEEAQPEPAAEVVEQPTQAPELDQAADSFADED

GenBank Info

gene - nusA
locus_tag - FAM19471-i1-1.1_000853
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638813.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transcription termination/antitermination protein NusA
protein_id - extdb:FAM19471-i1-1.1_000853

Gene Locus

Located on scaffold FAM19471-i1-1_scf12

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_000852
FAM19471-i1-1.1_000854