update range to 10000 bp
locus tag: FAM19471-i1-1.1_000871 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R11172 protein-Npi-phospho-L-histidine:cellobiose 6'-O-phosphotransferase; Protein N(pi)-phospho-L-histidine + Cellobiose <=> Protein histidine + 6-Phospho-beta-D-glucosyl-(1,4)-D-glucose kornec00500
KEGG reaction
 R11170 protein-Npi-phospho-L-histidine:N,N'-diacetylchitobiose 6'-O-phosphotransferase; Protein N(pi)-phospho-L-histidine + Chitobiose <=> Protein histidine + N,N'-Diacetylchitobiose 6'-phosphate
Gene Product
 PTS sugar transporter subunit IIC
Ortholog
 N0.HOG0003949 PTS sugar transporter subunit IIC
KEGG gene
 K02761 celB, chbC; cellobiose PTS system EIIC component kornec00500kornec02060
Eggnog Protein
 EP:pts13C
Eggnog Ortholog
 EO:COG1455
Eggnog Description
 ED:The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)

Occurs in the following pathway maps:

Pathway Description
kornec00500 Starch and sucrose metabolism
kornec02060 Phosphotransferase system (PTS)

Sequences

Nucleotide sequence (GC-content: 51.9 %):

ATGATTGACGCCATTGTTAAACGAACGGTTCGCTATCGCCAACATTCCTTTATCCGGGTGGTACGACGGACCCTGGCCGTCATCTTCCCCTTAGCCTTAATTGGCATTATCGCCCAGGTATTGTTCATCGTTTTTTTCTCTAACGATGGATACTTATACAACGTTTTATCGATCGGGGATTGGGTCCCTAAGGTGGTCTTAACCAAGGCGCAGTATTCCCTGTTAGCCCTCTCACAGGTCACAATTGAGATGCTAACGGTGTACGCGGCTTACGGGGCGGCCCGCTACACCGCCCAGCTCTACCAGATTGATGACCAGGTGCCGGGGATTACTGGGTTGGTGACTAGCCTCTTGCTTTCGGTACGCTACACGCCCAACCGCGGGGTCAGTTTCGATCAGAACATGATGAGCTACGGCTCGCTGTTAGGGGGCTTACTCGTTGGTTACTTAGTCGGTCAAATCTTTCGCTGGTTAGGGAAAAAGAACCGGCTCAAACCCGGTCAACCAATTCACACGGTCGACATTGAAGAGCAAGTGGCCGCCTACACCCGGCCAATCTTAGTCATTATGCTTGGCGCTTTAGCGATTAACTTTGTCTTAAACCTCGTGTCTTATTATTCTTCTTACACCCAAGCGGCGGCGTTGATGCAAAGTCTGAGTTCGGGTAACACACCCTTTTGGCTCGAGCTCTTGATGGTTTGCCTGACGACTTTGCTGGAGTGGTTAGGGATTAGCGGCTCTTACAACTTCCAGCTGGGAACTGACAGCACGGAGGCGATGGCGAACCTAAATTACGCCTTGGCGCACCACACCGCATACGGGGTGCCGTATCCTTACCTTGGCTCTTCTCTTTACAACTCCTTTGCCAATTTTGGGGGAATCGGGCTCGCGTTGGCCCTGTTACTTGCAATGGCGATTGTGGCCCACAGTTATAACGAACAACGGATGGTGCGGGCCAACTTCTTACCGGTGCTGTTTAACAGGAACACGGGGCTAATGGTCGGCTTGCCGGTTCTTTTAAATCCGCTCTACATCTTGCCGGCGGTCTTTTTGCCAATGGTCAACATTTTAATTGCGGCCTTTGCCATCTTCATTCACTTAATCCCGACCCCGGTTTACTGGGTGCCGGATGGGACGCCGGGGCCGTTGGTGGCTTACGTTGGTAGTAACGGTAATTTCGTTACCTTACTCTTCACCCTTGCCCTGCTTGCCTTTGACGTTTGGGTCTACATCCCCTTTGTTCGGCTTTCCCTGGCCGTGGAGGGGCGGATCCGCGAAATCGATGCAAAGGAGGACCACAAAGATGTTTAA

Protein sequence:

MIDAIVKRTVRYRQHSFIRVVRRTLAVIFPLALIGIIAQVLFIVFFSNDGYLYNVLSIGDWVPKVVLTKAQYSLLALSQVTIEMLTVYAAYGAARYTAQLYQIDDQVPGITGLVTSLLLSVRYTPNRGVSFDQNMMSYGSLLGGLLVGYLVGQIFRWLGKKNRLKPGQPIHTVDIEEQVAAYTRPILVIMLGALAINFVLNLVSYYSSYTQAAALMQSLSSGNTPFWLELLMVCLTTLLEWLGISGSYNFQLGTDSTEAMANLNYALAHHTAYGVPYPYLGSSLYNSFANFGGIGLALALLLAMAIVAHSYNEQRMVRANFLPVLFNRNTGLMVGLPVLLNPLYILPAVFLPMVNILIAAFAIFIHLIPTPVYWVPDGTPGPLVAYVGSNGNFVTLLFTLALLAFDVWVYIPFVRLSLAVEGRIREIDAKEDHKDV

GenBank Info

locus_tag - FAM19471-i1-1.1_000871
inference - COORDINATES: similar to AA sequence:RefSeq:WP_004563185.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - PTS sugar transporter subunit IIC
protein_id - extdb:FAM19471-i1-1.1_000871

Gene Locus

Located on scaffold FAM19471-i1-1_scf13

FAM19471-i1-1.1_000870
FAM19471-i1-1.1_000872