locus tag:
FAM19471-i1-1.1_000909
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000193 |
ATP-dependent Clp protease ATP-binding subunit |
|
|
KEGG gene
|
K04086 |
clpL; ATP-dependent Clp protease ATP-binding subunit ClpL |
|
|
KEGG gene
|
K03697 |
clpE; ATP-dependent Clp protease ATP-binding subunit ClpE |
|
|
Eggnog Protein
|
EP:clpE |
|
|
|
Eggnog Ortholog
|
EO:COG0542 |
|
|
|
Eggnog Description
|
ED:associated with various cellular activities |
|
|
|
Gene Product
|
ATP-dependent Clp protease ATP-binding subunit |
|
|
Sequences
Nucleotide sequence (GC-content: 55.6 %):
ATGGCACGAATTCCAGTAGATCCATTTAACAACGACATGGACGACTTATTTAACCAACTCATGGGGGGAATGAACGGGTTCAACAGCGACAACCGCCGTTACCTGATTAACGGGCGCGAAGTAACGCCTGAAGAGTACGCCGCCTTTCGCCAGACCGGGAAGCTCCCGGGTGCAACTGACCCAACCCAAGCAAAAACTAAGCAACCACAACCAGACAGCATGCTAGCTAAGCTCGGCCGCAACTTGACGCAAGAAGCCAAGGAAGGCAAGCTCGACCCGGTGATCGGCCGTAACAAGGAGATTCAAGAAACCGCCGAGATTCTGTCACGGCGGACCAAGAACAACCCAGTGTTAGTCGGTGACGCCGGGGTCGGCAAGACGGCGGTGGTGGAGGGCCTAGCCCAAGCCATCGTGGCCGGCGACGTTCCCGCTGCCATCAAGAACAAGCAGATTATTTCGATTGACATTTCCAGCTTGGAGGCCGGGACCCAATACCGGGGCTCCTTTGAAGAGAACATGCAAAAGCTGATCGACGAGGTCAAAAAGGACGGCAACGTGATCCTCTTCTTCGATGAAATTCACCAAATCATCGGGGCCGGAAACGCCGGCGACGCCTCGGGTTCCAAGGGGATGGCCGATATCTTAAAGCCGGCCCTTTCCCGCGGTGAAGTGACCTTAATCGGGGCCACCACCCAAGACGAGTACCGTAACACGATTTTAAAGGACGCCGCTTTATCTCGGCGGTTCAACCAAGTAACGGTTAACGCCCCGAGCAAGGAAGACACTTTCAAGATCCTGCAAGGTTTGCGTAAGCTGTACGAAAAGCACCACAACGTTTCCTTGCCCGACGACGTCTTAAAGGCCGCCATCGATTACTCGGTTCAATACATTCCGCAACGCTCCTTACCTGACAAGGCGATCGACTTGATTGACGTCACGGCCGCTCACCTGGCCTCCAAGCACCCGGTCAAGGACGCCAAGACGATTGAAGAGGAGATCAAAAAGGCCGAGGCCAAGCAACAAGAAGCGGTTGAAAAAGAGGATTACCAAGCCGCCCAAGAGGCCAAGGACCAGGTGGCCAAGTTGCAAGACCAACTCAAGGACCACTCCGAATCCGAACGGGTCGTGGCAACGCCGAGTGACGTGGCCGCCGCCGTTGAACGGATGACCGGGATCCCGGTGTCCAAGATGGGTGCTTCCGATATCGAACGCTTAAAGGGCTTAGCCACCCGTTTGGAAGGCAAGGTTATCGGCCAACAAGAGGCCGTCGAAGCCGTGAGCCGGGCGATCCGGCGTAACCGGGCCGGCTTTGATGAAGGTAACCGGCCAATTGGGAGCTTCCTTTTCGTCGGCCCAACCGGGGTCGGTAAGACCGAATTGGCTAAGCAACTAGCCCTCGATATGTTTGGTTCCACCAACGACATCATCCGGCTCGACATGTCCGAATACACCGACCGGACGGCGGTTTCCAAGTTGATCGGGACCACCGCTGGCTACGTGGGTTACGACGATAACTCCAACACCCTGACCGAAAAGGTAAGGCGTCACCCGTACTCGATCGTCTTGCTCGACGAAATCGAAAAGGCCAACCCGCAAGTCATCACCTTGCTCTTGCAAGTCTTAGATGATGGGCGCCTAACCGATGGGCAAGGGAACACGGTGGACTTCAAGAACACCATCATCATCGCCACCTCTAACGCCGGCTTCAGTAGCGACGCCGTGGCGGGCGAGGACGCTAAGTTGATGGACAAGTTGCAACCGTACTTCCGGCCAGAATTCCTGAACCGGTTTGACGCAATCGTGGAATTCCACACCCTGACCAAGGACGACTTAAAGCAAATCGTCGACCTGATGTTAGCCGGGGTTAACGAAACCTTGGCCAAGAAGGGGATGGACGTCACGGTGACCGATGAAGTGAAGAACTACCTGATTGACAAGGGCTATGACAAGACGATGGGGGCCCGGCCACTGCGGCGGGTGGTGGAACAAGAGATCCGTGACAAGGTGACGGATTACTACCTCGACCACCTGGACGAAAAGCACCTCGTGGCCACCTTAAAGGACGGCCAAGTCGTGATTGAACAAGCAAAGTAA
Protein sequence:
MARIPVDPFNNDMDDLFNQLMGGMNGFNSDNRRYLINGREVTPEEYAAFRQTGKLPGATDPTQAKTKQPQPDSMLAKLGRNLTQEAKEGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVAGDVPAAIKNKQIISIDISSLEAGTQYRGSFEENMQKLIDEVKKDGNVILFFDEIHQIIGAGNAGDASGSKGMADILKPALSRGEVTLIGATTQDEYRNTILKDAALSRRFNQVTVNAPSKEDTFKILQGLRKLYEKHHNVSLPDDVLKAAIDYSVQYIPQRSLPDKAIDLIDVTAAHLASKHPVKDAKTIEEEIKKAEAKQQEAVEKEDYQAAQEAKDQVAKLQDQLKDHSESERVVATPSDVAAAVERMTGIPVSKMGASDIERLKGLATRLEGKVIGQQEAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSTNDIIRLDMSEYTDRTAVSKLIGTTAGYVGYDDNSNTLTEKVRRHPYSIVLLDEIEKANPQVITLLLQVLDDGRLTDGQGNTVDFKNTIIIATSNAGFSSDAVAGEDAKLMDKLQPYFRPEFLNRFDAIVEFHTLTKDDLKQIVDLMLAGVNETLAKKGMDVTVTDEVKNYLIDKGYDKTMGARPLRRVVEQEIRDKVTDYYLDHLDEKHLVATLKDGQVVIEQAK
GenBank Info
locus_tag - FAM19471-i1-1.1_000909
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638421.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ATP-dependent Clp protease ATP-binding subunit
protein_id - extdb:FAM19471-i1-1.1_000909
Gene Locus
Located on scaffold FAM19471-i1-1_scf14
FAM19471-i1-1.1_000908
