update range to 10000 bp
locus tag: FAM19471-i1-1.1_000923 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0003545 MBL fold metallo-hydrolase
Gene Product
 MBL fold metallo-hydrolase
KEGG gene
 K00784 rnz; ribonuclease Z [EC:3.1.26.11] kornec03013
Eggnog Protein
 EP:vicX
Eggnog Ortholog
 EO:COG1235
Eggnog Description
 ED:domain protein
EC Number
 EC:3.1.26.11 tRNase Z; 3 tRNase; tRNA 3 endonuclease; RNase Z; 3' tRNase

Occurs in the following pathway maps:

Pathway Description
kornec03013 RNA transport

Sequences

Nucleotide sequence (GC-content: 58.8 %):

GTGGTGCAAGCAACAGTGGCAGATACAATTCATTACAGCATCTTAGCCTCCGGATCGGGGGGCAATGCGACCTACTTGGAAACGGCGGGTCACCGGATCTTGATTGACGCGGGCTTGTCCGGTAAGCAGCTGGAACAGCGGATGGAAGCGATCGGGCGGTCCTTAGACCAGGTCGAGGCGCTGTTTGTAACCCACGAACACAGCGACCACAGCCATGGGGTGGGGGTCTTGGCGCGCCGTTATGGAATGCCGGTATACGCCAACGCGGGTACCTGGGCGGCCGTGGAGGGCAAGATCGGTAAGATCGCTCCAGACCAAAAGCAACTCCTGGCGCCGGGCAAGTTCTTAGACCTGGGCGATCTGCAAGTCGAGGCCTTTGCCGTCTCCCACGACGCCGCGCAGCCCCAGTTTTACCAAATTCACCACGACGACCAATCCTTTGTGATCCTGACCGACACCGGTTACGTTTCCGACCGGGTCGTTCAGACGATCAAAAACGCCGATGGCTACTTGATAGAGTGCAACCACGACCCGGAAATGCTACGGATGGGGCCCTATTCATGGCCGCTTAAGCAACGGATCCTAGGCGACACCGGCCACTTATCCAATGAAGAGGGGGCCGGGGCCCTAATGGAAGTGATCGGCGAGCGGACCAAGCGGGTCTTTTTGGGCCACCGCAGCCAGCACAACAACATGCGGTCCCTGGCGCACCTGACCGTGGCTAGCATCTTGGAAAACCACGATTTCGGTGTCGACCACGACTTTAAGTTGGCGGACGCGGAGCCCGATCAACCCAGCCCGCTCTTGAGTCTATAA

Protein sequence:

MVQATVADTIHYSILASGSGGNATYLETAGHRILIDAGLSGKQLEQRMEAIGRSLDQVEALFVTHEHSDHSHGVGVLARRYGMPVYANAGTWAAVEGKIGKIAPDQKQLLAPGKFLDLGDLQVEAFAVSHDAAQPQFYQIHHDDQSFVILTDTGYVSDRVVQTIKNADGYLIECNHDPEMLRMGPYSWPLKQRILGDTGHLSNEEGAGALMEVIGERTKRVFLGHRSQHNNMRSLAHLTVASILENHDFGVDHDFKLADAEPDQPSPLLSL

GenBank Info

locus_tag - FAM19471-i1-1.1_000923
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390659.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - MBL fold metallo-hydrolase
protein_id - extdb:FAM19471-i1-1.1_000923

Gene Locus

Located on scaffold FAM19471-i1-1_scf14

FAM19471-i1-1.1_000922
FAM19471-i1-1.1_000924