OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_000938
locus tag:
FAM19471-i1-1.1_000938
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Product
type I restriction endonuclease subunit R
Ortholog
N0.HOG0000897 type I restriction endonuclease subunit R
KEGG gene
K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
Eggnog Protein
EP:hsdR
Eggnog Ortholog
EO:COG0610
Eggnog Description
ED:Subunit R is required for both nuclease and ATPase activities
EC Number
EC:3.1.21.3 type I site-specific deoxyribonuclease; type I restriction enzyme; deoxyribonuclease (ATP- and S-adenosyl-L-methionine-dependent); restriction-modification system; deoxyribonuclease (adenosine triphosphate-hydrolyzing); adenosine triphosphate-dependent deoxyribonuclease; ATP-dependent DNase; type 1 site-specific deoxyribonuclease
Sequences
Nucleotide sequence (GC-content: 38.4 %):
G T G T C A A A A G G A T A C T T A T T A G A A T C T G A T G T C G A A A A T C T G G C A T T A G A T A C C C T A C A A A A A G T A G G C T A T G A T G T T T A T A A A A G T C C A A G T A C A A C T T C T C C T A A T C C A G A A A T T G A C A A G A T G C G A A A T A G T G A C C A T G C G G T A G C C G T T T T A A C T G A A A A A C T G C A G G C G T C C C T A A A A A A A C T T A A C C C A G G C T A T C C A G A G G A G A T C T A T A A A G A G G C C T T A C G C C A G T T A A C T C G C T T G G C C G A T A A T C C T G A T A T G A T G G T G A A C A A T C A C T A T T T T C A T A A A T T A C T A A T T G A G G G A A T T C G A G T T A A A A C A A C A G T T A A T G G T G A A A A T C G A A C G G A A G T T C T T T A T C C A A T T G A C T T T G A C C A T G T G G A A A A T A A C C A A T T C G T G G C A A C A A A C C A G T T T A C T T T T A A G G G T A G T C A T G A A C G G C G A C C T G A T A C T A C T A T C T T T A T T A A T G G G C T A C C A G T G G T G A C A T T T G A A T T T A A A G A T G C T A G C A A T C C T A A C G T C A G C A T T G A A A A T G C C T A C C G A C A A C T G C A A A C T T A T A A A G C T G A G A T T C C T G A A T A C C T G A A A T A T A A T G A A A T T T T A A T T G C A T C G G A T G G T A T T A A T T C T C G A G C T G G A T C T T T A A C C G C T G G T T T T G A T C G T T T T A T G C G T T G G C G A G C A C C A A A G A A T G T T A C T A C T G A T G A T G A T C T T G A A T T A G A A A C A A T G A T T A A G T A T A T G C T G A C A C C T A A G G A T T T A C T T A A T C T A A T T G A G A A C T T C A T T A T T T T T G A A A C T G A T G G T G A T A A T A C A A T T A A G A T C C T A G C G G C T T A C C A C C A G T A C T A C A T G G T T A A C A A A G C G G T T A A A G C T G C T A A A A G A A C G A T G G C T G A C C C T A A T G A C A A A C G C A T C G G G G T A G T T T G G C A T A C T A C C G G T T C A G G G A A A A G T T T A T C G A T G G T G T T C T T T G C T A G T A T T G T G G C T A G A A A A C T T A A T A A T C C A A C A A T G C T G G T A A T T A A T G A C C G T A A T G A T C T A G A T G A C C A A T T G T T T G A T A C C T T T G C T G C T G C A C A T G A A T T T T T A C G G C A A G C T C C A G A A C A T G C A G A A T C A C G T G A T G A A C T T C G T A A A T T T A T G G A T A A G C A A G C G G G G G G A A T T A T C T T T T C A A C T A T T C A A A A G T T C T C A C C C G A C T T C G A A A G T G G A G A A A C T G A A A T G C C A G T T T T G A C T A A T C G G A G T G A T G T A A T T G T T A T T G C G G A T G A A G C T C A C C G A A C T C A A T A T G G C T T G A A G G C T A A G T T T A C T A A T A A T G G A C T A C G T T A T G G A T T T G C T A A G T A C T T A C G T G A C G C T T T G C C T A A T G C T T C A T T C A T T G G T T T T A C T G G A A C C C C A A T T T C T A C T G C T G A T A A A T C A A C T G T T G C A G T C T T T G G T A A T T A C A T T G A T G T T T A T G A T A T T A C T C A G G C C G T T A A T G A C C A C G C C A C A G T A A A A A T C T A T T A C G A A A G T C A T G T A T T C C C T C T G A A G T T G A A G T C C G A T G C A C A G G C T A A G T A T C A A C A A C T G C T A A A A G A G G C C A A C T T A G A T G A T G A T C C T A A C T T A G A A G A A A A T A C T C G A C G T A A C C G A G A A T T C T C C A G T T T G G A G G C A T T A G C T G G T G C T C A G C C G C G A C T A G A A A G T A T T G C T A A G C A T T T T G T T A A T C A T T T C G A A G C A C G A C A A A A A G A G A C T T T T G G C A A G G C A A T G A T T G T T G A A A T G T C G C G T C G T A A C G C A G T T C G T C T C T A T A A T C A A A T C A T C A A G T T A C G C C C A G A G T G G G A T A G T G A T G A C C T T A A T A A A G G G A A A A T C A A G G T T G T A A T G A C G T C T T C T G C G G C C G A T G G T C C A G A A A T G G C A A A G T T T C A G A C C A G T A A A G C T G A T C G T C G A G T C C T T C A A A A A C G G A T G A A A G A T A A T A A T G A T G A A T T A C A G A T T G T T A T C G T G G T T G A T A T G T G G T T G A C A G G T T T T G A C G T A C C T T C G A T G A A T A C T A T G T A C A T T G A T A A G C C G A T G A A G G G A C A C A A T T T A A T T C A A G C T A T T G C T C G T G T C A A C C G G G T C T T T A A G G A C A A A G A T A G T G C C T T A A T T G T G G A C T A C A T T G G T A T C G C T G A A A A T C T G A A A G A A G C G C T G A A C G T T T A T T C C A C A G A A G A C C A G G G G C A A G T G G G T A T C A A T A T G C A A A A A G C C C T A G C C C T T T T G A A A G A G A A A T A T G A C A T C A T T A C T A A T G A T T T C C T A T A T G G A G T T G A T T A C T C A G G G T T T G A T T C A G A A G A T G G A G C T G T T C G C T T A A A G A T T A C T C G G C G A G T T G C T A A C G A G A T T C T A G G T G A G G A C G A G G A A A C A C A A C A A A A G T T T T T A G A T G T T G T G A C T G A A T T A C A G A A A G C T T A T G C T T T G A C T T C A A C T C A A T C G G A A G C A C A A G C C T A T G G T A A A G A G A T T G C T T T C T T T A A G A C A G T T A A G G T G T T T A T T C A A A A A C T A A A G C A A C C A A C T A C G C C T G T C G G C T C G G A A G A A C A T A C T G A T G T T A A A T A T C A A A T G C A A C A G T T A T T G G A T C A G T C C A T C A T T T C T G A A C C C A A T G T T G A T A T C T A C A A T G A A C T A G G T A T A A A A A G A C A A A G C A T T G A T T T A A T T T C A G A T G A A T T C T T G C A G A A A G T T A A T A G T A T G C C G G A G C A A G A T G T T G C A A T T A C C T T G T T G G A A A A A T T G C T T A A A G G T A A G A T C A A A G C A A T G A T G A A A A G C A A T A A G G T T A C G T C C G A A A A G T T T G A A G A C A T G C T C C A T A A A T C A A T T G A C G A A T A T A A T C A A C G T G G G A T T A C T A G T G A A A T T G T T A T C C G T A A G T T G A T T G A T A T G G C T A A A A A G A T T A A T G C A G A G C A A G A A A A G G G T A A G G A C T T A G G G C T C A G T C A A G A A G A G A T C G C C T T T T A T G A T G C A T T A G C T G A T C A T A A G A A A G C G G T C G A A G T T C T T G G A G A A A A G A A A C T T C A T T T G A T T G C T C A G G A G C T A G T C A A G C T A G T T A A A G A A G A A G C T G G C G T T G A T T G G G A A A A G A G A C G T A A T A T T C A A G C T A A A A T G C G T G T A G C T G T A A A A C A C C T G C T T A G A A A G T A T G G T T A T C C A C C T G A T A T T G C T C C G G A A G C A G T C A A T A C C G T G G T A G A A C A A G C A G A A T T G A T G G C A A C G A A T G A T T A A
Protein sequence:
M S K G Y L L E S D V E N L A L D T L Q K V G Y D V Y K S P S T T S P N P E I D K M R N S D H A V A V L T E K L Q A S L K K L N P G Y P E E I Y K E A L R Q L T R L A D N P D M M V N N H Y F H K L L I E G I R V K T T V N G E N R T E V L Y P I D F D H V E N N Q F V A T N Q F T F K G S H E R R P D T T I F I N G L P V V T F E F K D A S N P N V S I E N A Y R Q L Q T Y K A E I P E Y L K Y N E I L I A S D G I N S R A G S L T A G F D R F M R W R A P K N V T T D D D L E L E T M I K Y M L T P K D L L N L I E N F I I F E T D G D N T I K I L A A Y H Q Y Y M V N K A V K A A K R T M A D P N D K R I G V V W H T T G S G K S L S M V F F A S I V A R K L N N P T M L V I N D R N D L D D Q L F D T F A A A H E F L R Q A P E H A E S R D E L R K F M D K Q A G G I I F S T I Q K F S P D F E S G E T E M P V L T N R S D V I V I A D E A H R T Q Y G L K A K F T N N G L R Y G F A K Y L R D A L P N A S F I G F T G T P I S T A D K S T V A V F G N Y I D V Y D I T Q A V N D H A T V K I Y Y E S H V F P L K L K S D A Q A K Y Q Q L L K E A N L D D D P N L E E N T R R N R E F S S L E A L A G A Q P R L E S I A K H F V N H F E A R Q K E T F G K A M I V E M S R R N A V R L Y N Q I I K L R P E W D S D D L N K G K I K V V M T S S A A D G P E M A K F Q T S K A D R R V L Q K R M K D N N D E L Q I V I V V D M W L T G F D V P S M N T M Y I D K P M K G H N L I Q A I A R V N R V F K D K D S A L I V D Y I G I A E N L K E A L N V Y S T E D Q G Q V G I N M Q K A L A L L K E K Y D I I T N D F L Y G V D Y S G F D S E D G A V R L K I T R R V A N E I L G E D E E T Q Q K F L D V V T E L Q K A Y A L T S T Q S E A Q A Y G K E I A F F K T V K V F I Q K L K Q P T T P V G S E E H T D V K Y Q M Q Q L L D Q S I I S E P N V D I Y N E L G I K R Q S I D L I S D E F L Q K V N S M P E Q D V A I T L L E K L L K G K I K A M M K S N K V T S E K F E D M L H K S I D E Y N Q R G I T S E I V I R K L I D M A K K I N A E Q E K G K D L G L S Q E E I A F Y D A L A D H K K A V E V L G E K K L H L I A Q E L V K L V K E E A G V D W E K R R N I Q A K M R V A V K H L L R K Y G Y P P D I A P E A V N T V V E Q A E L M A T N D
GenBank Info
locus_tag - FAM19471-i1-1.1_000938
Gene Locus
Located on scaffold FAM19471-i1-1_scf15
FAM19471-i1-1.1_000937
