locus tag:
FAM19471-i1-1.1_000943
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
SAM-dependent DNA methyltransferase |
|
|
|
Ortholog
|
N0.HOG0000982 |
SAM-dependent DNA methyltransferase |
|
|
KEGG gene
|
K03427 |
hsdM; type I restriction enzyme M protein [EC:2.1.1.72] |
|
|
Eggnog Protein
|
EP:hsdM |
|
|
|
Eggnog Ortholog
|
EO:COG0286 |
|
|
|
Eggnog Description
|
ED:type I restriction-modification system |
|
|
|
EC Number
|
EC:2.1.1.72 |
site-specific DNA-methyltransferase (adenine-specific); modification methylase; restriction-modification system |
|
Sequences
Nucleotide sequence (GC-content: 38.8 %):
ATGGCAACCAAGTCTAAGGAATTAAGTATTGAGGACAAATTATGGAAAACAGCTGATGCGTTGCGTGGCAGCATGGACGCTTCAGAATATCGTAATGTTGTACTGGGGTTAATTTTCCTTAAGTATGTATCAGATTCATTTGAAACCAGGCATAATGAATTGTTGAAATCAGATTATCCTGAAGATGCTGAAGATCCTGATATGTATCTTTCGGAAAATATTTTTTGGGTACCGAAAGAAGCACGTTGGGAATTAATTCAACAATCAGCAAAAACACCTCAAATTGGTGAAATTATTGACAGTGCAATGGATGCAATTGAAAAAAGCAATGATTCATTGCGTGGGGTTTTAAGTAAGAACTATGCATCTCCAGATCTTGATAAAACTCGTCTAGGTGAAGTGGTTGATTTAATTTCAGATATCAGTCTAGGTGATAAACATGCCAAGCAATCTGATATTTTGGGTCGTGTATATGAGTACTTTCTCAATGAATTTGCCTCTCAAGAAGGTAAAAAGGGTGGTGAATTTTACACACCACGTTCCATTGTTCGTACGCTAGTAGAAATGATTGAACCGTACAAAGGACGTATTTATGACCCATGTTGCGGGTCTGGTGGGATGTTTGTGCAATCTGACAAATTCGTCCAAGAACACCAAGGTAAAATCGGCGACCTATCAGTTTATGGTGAAGAGTCTAACCCAACCACTTGGAAATTAGCAAAGATGAATCTTGCCATTCGTGGTATTGATAATAACCTTGGGCCACATCAAGGTGATACTTTTACTAATGACCTGCACAAAGGTGAAAGATTTGATTTTATCCTAGCTAATCCACCATTTAATGTAAAAAATTGGAATGGTGACAAGTTGCGTGAAGATGCTCGCTGGCAATATGGAGTTCCACCAGTTGGTAATGCCAACTATGCCTGGATTGAACATATCATTAGCAAATTAGCACCTGATGGGAAAGCCGGATTCGTGTTAGCTAACGGTGCTTTATCAACCTCTACAACGGCAGAGCATGATATTCGTAAAGCAATTCTTGAAGATGACAAGATTGATGCGATCGTCGCCTTACCGGATAAAATGTTTTATTCAACTGGTATCCCAGTTTCACTTTGGTTCGTTGATATGAACAAGGAATCTGAAAATGAACGAGATAGAAAAGGTGAGACTTTATTTATCGATGCGCGTGATCTTGGTGAAATGATTGATCGAACTCATCGGGCATTCTCAAAGGAAGATATTAAAAAAGTAGCAGACACATATCATGCATACCGTGGTACCAATGATCAAGAGTATAAGGATGTGCCCGGATTTTGTAAGGTAGCCAAACTAGATGAAATTGCAAAGAATGATTACGTATTAACACCTGGTAGGTACGTTGGCTTAGCAAAACAAGAAGACGATGGTGAACCTTATGAAGTTAAGATGGCTCGTCTGACTGGAGAATTGAAAAAACAGTTTGAGGAGAGTAATAAGCTCCAAGCTGAGATCAAAGATGTATTGAAGGAGCTTGGATATGAAATATAG
Protein sequence:
MATKSKELSIEDKLWKTADALRGSMDASEYRNVVLGLIFLKYVSDSFETRHNELLKSDYPEDAEDPDMYLSENIFWVPKEARWELIQQSAKTPQIGEIIDSAMDAIEKSNDSLRGVLSKNYASPDLDKTRLGEVVDLISDISLGDKHAKQSDILGRVYEYFLNEFASQEGKKGGEFYTPRSIVRTLVEMIEPYKGRIYDPCCGSGGMFVQSDKFVQEHQGKIGDLSVYGEESNPTTWKLAKMNLAIRGIDNNLGPHQGDTFTNDLHKGERFDFILANPPFNVKNWNGDKLREDARWQYGVPPVGNANYAWIEHIISKLAPDGKAGFVLANGALSTSTTAEHDIRKAILEDDKIDAIVALPDKMFYSTGIPVSLWFVDMNKESENERDRKGETLFIDARDLGEMIDRTHRAFSKEDIKKVADTYHAYRGTNDQEYKDVPGFCKVAKLDEIAKNDYVLTPGRYVGLAKQEDDGEPYEVKMARLTGELKKQFEESNKLQAEIKDVLKELGYEI
GenBank Info
locus_tag - FAM19471-i1-1.1_000943
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003674180.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - SAM-dependent DNA methyltransferase
protein_id - extdb:FAM19471-i1-1.1_000943
Gene Locus
Located on scaffold FAM19471-i1-1_scf15
FAM19471-i1-1.1_000942
