update range to 10000 bp
locus tag: FAM19471-i1-1.1_001025 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R02922 Creatinine iminohydrolase; Creatinine + H2O <=> N-Methylhydantoin + Ammonia kornec00330kornec01100
KEGG reaction
 R01411 5-Methylcytosine aminohydrolase; 5-Methylcytosine + H2O <=> Thymine + Ammonia kornec00240kornec01100
KEGG reaction
 R00974 Cytosine aminohydrolase; Cytosine + H2O <=> Uracil + Ammonia kornec00240kornec01100
Ortholog
 N0.HOG0004596 cytosine deaminase
KEGG gene
 K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] kornec00240kornec00330kornec01100
Eggnog Protein
 EP:codA
Eggnog Ortholog
 EO:COG0402
Eggnog Description
 ED:cytosine deaminase
EC Number
 EC:3.5.4.1 cytosine deaminase; isocytosine deaminase kornec00240kornec01100
Gene Product
 cytosine deaminase
Gene Code
 codA

Occurs in the following pathway maps:

Pathway Description
kornec00240 Pyrimidine metabolism
kornec00330 Arginine and proline metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 56.2 %):

ATGCTAATTAAAAACGTCCACGTTAACAACCAACCCGAACTCGTTGACGTCGCGATTACCGACGGCAAGTTTACCGCTATTGAAGCCGGGCTAACTCCCAAGCCCGGCGAGCAGGTAATCGAGGGGAACGGGAAACTTTTGTTGCCACCCTTCATTGATTCCCACGTCCACTTGGATGCGACTTTGACGGCGGGGCAGCCCGAGTTTAACGAATCCGGGACCCTCTTTGACGGGATCCGAATCTGGAGCGAGCGTAAAAAGTCGCTAACCAAAGAAGACGTTAAGAAGCGGGCTAAGCAGACGATCATGAAGATGGTTGGCCACGGAATCCAACACGTCCGCTCCCACGTTGACGTGACCGACCCGCACCTGATCGCCGCCCAGGCCCTCTTGGAACTCAAACACGACTTAAAAGACCAGGTTGACCTGCAGTTGGTGGCCTTCCCCCAGGAGGGGATCTTAAGCTTCCCGCACGGCAAGGAATTAATGGAACAAGCGGTCAAAGAGGGGCTCGATGTGGTCGGGGGGATCCCGCACTTTGAGTTTTCGACCGAGTACGGTTGGCAATCGGTCCACTTCTTAATGGCCCTAGCCGACAAGTATGGTAAGCTAGTTGACGTGCACTGCGACGAAATTGACGACCCAATGTCGCGCCACCTAGAAGTGCTGGCGACCGAAGCGTACGAACGGCAAATGGGCGACCGCGTGACGGCGAGCCACACCACGGCGATGGGTTCGTATAACGACGCGTACACCTACAAGTTGTTCCGACTCTTGAAGATGAGCGGGGTTAACTTCGTGGCTAACCCGCTGGTGAACGTTCACCTGGGCGGGCGCTTTGATACCTACCCGAAGCGGCGTGGCGTCACCCGGGTCAAGGAGCTCGACGCCGCCGGGATCAACGTTTCCTTTGGTGAAGATGACGTCCAGGACCCGTGGAACCCGCTGGGTGATGGTAACATGCTCGACGCCGTGACGATGGGGGTCTACATTGCCCACCTGATGGGTTATTCCCAGTTGCAAGACTCGTTTAAGTTTGTGACGACCAACGCGGCCAGGACCCTGCACATCGAGGACCAGTACGGGATTGAGGTCGGTAAGCCCGGCGACTGCATCTTATTAAACGGTCAGAACTTCTACCAGGCCCTAAACCAACACGCCGAAGTCCTGTACAACATCCGCCACGGACGTGTTCTGGCCCAAACTAAGCCGGCCGAGACGACGATCCACTTAAATTAG

Protein sequence:

MLIKNVHVNNQPELVDVAITDGKFTAIEAGLTPKPGEQVIEGNGKLLLPPFIDSHVHLDATLTAGQPEFNESGTLFDGIRIWSERKKSLTKEDVKKRAKQTIMKMVGHGIQHVRSHVDVTDPHLIAAQALLELKHDLKDQVDLQLVAFPQEGILSFPHGKELMEQAVKEGLDVVGGIPHFEFSTEYGWQSVHFLMALADKYGKLVDVHCDEIDDPMSRHLEVLATEAYERQMGDRVTASHTTAMGSYNDAYTYKLFRLLKMSGVNFVANPLVNVHLGGRFDTYPKRRGVTRVKELDAAGINVSFGEDDVQDPWNPLGDGNMLDAVTMGVYIAHLMGYSQLQDSFKFVTTNAARTLHIEDQYGIEVGKPGDCILLNGQNFYQALNQHAEVLYNIRHGRVLAQTKPAETTIHLN

GenBank Info

gene - codA
locus_tag - FAM19471-i1-1.1_001025
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391211.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - cytosine deaminase
protein_id - extdb:FAM19471-i1-1.1_001025

Gene Locus

Located on scaffold FAM19471-i1-1_scf17

FAM19471-i1-1.1_001024
FAM19471-i1-1.1_001026