update range to 10000 bp
locus tag: FAM19471-i1-1.1_001034 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 parE
Ortholog
 N0.HOG0000713 DNA topoisomerase IV subunit B
KEGG gene
 K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071103 DNA conformation change
Gene Ontology
 GO:0061505 -
Gene Ontology
 GO:0051276 chromosome organization
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042623 -
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0017111 ribonucleoside triphosphate phosphatase activity
Gene Ontology
 GO:0016887 ATP hydrolysis activity
Gene Ontology
 GO:0016853 isomerase activity
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0016043 cellular component organization
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009295 nucleoid
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008094 ATP-dependent activity, acting on DNA
Gene Ontology
 GO:0007059 chromosome segregation
Gene Ontology
 GO:0006996 organelle organization
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006265 DNA topological change
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
Gene Ontology
 GO:0003916 DNA topoisomerase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:parE
Eggnog Ortholog
 EO:COG0187
Eggnog Description
 ED:Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
EC Number
 EC:5.6.2.2 DNA topoisomerase (ATP-hydrolysing); type II DNA topoisomerase; DNA-gyrase; deoxyribonucleate topoisomerase; deoxyribonucleic topoisomerase; topoisomerase; DNA topoisomerase II
Gene Product
 DNA topoisomerase IV subunit B

Sequences

Nucleotide sequence (GC-content: 55.5 %):

GTGGCACAAGAAGAATACAAGTACGACGCATCCTCGATCAAAATCCTGAAGGGACTGGAGGCGGTTCGCAAGCGGCCAGGGATGTACATTGGCTCGACCGATGCCCACGGGCTTCACCACCTAGTGTACGAAATCGTTGATAACGCCGTCGATGAAGCCCTGTCCGGTTTTGGTGACGAGATCAACGTGACGATTGAACCAGACAACGCCATTACGGTGCAAGACCATGGGCGGGGGATGCCAGTGGGGATGCACGAAAGCGGCAAGCCCACCCCGGAAGTCATCATGACCATCCTTCACGCCGGGGGGAAATTCGGCCAAGCGGATGGCTACAAGAGCTCCGGGGGCCTGCACGGGGTCGGGGCCTCCGTAGTTAACGCCCTGTCTTCGAAGTTAACCCTAACGATCGTGCGGGACCACGTCCGCTACCAAGAGAAGTTTCGTGACGGTGGTCAACCAATCGGCACCCTAAAGGAACTGGGCAAGACCCGGGAAGGATCGGGAACCACGGTCACCTTTAAACCGGATCCCACGATCTTTTCGACCACCGTTTACGACTACCAAACCTTGGCAAGGCGCCTGCGCGAGTCCGCCTTCTTACTCAAGGGGGTTAAGATCACCCTGACCGACAAGCGGGAAGGAATGGAGCAAGAAGAGGTCTTTCAGTTTGAAAACGGGATTGAAGACTTCGTGGCCTACCTCAACGAAGATAAGGACACCCTCGGGAAGGTCTTTTCCTTTACCGGCACCCAAGACGGGGTCGAAGTCGACGTGGCCGCCCAGTACAACGATGGGTACACCGAAAACCTACTGAGCTTCGTCAACAACGTCCGTACCCCGGGTGGTGGTACCCACGAGGTCGGTTTCCGTGGTGCTTGGACCAAAACCTTTAACGATTACGCCCGCAAGGTGGGGCTTTTAAAGGAGCGCGATAAGAACCTGGAGGGGACCGACGTCCGAGAGGGGCTGACCGCCGTTGTTTCCGTCCGGATTCCGGAGCGGATCCTGCAGTTTGAGGGGCAAACCAAGGGGAAGTTAGGGACGCCAGAGGCGCGCAAGATTGTTGATACGATCGTGTCCGAACAGTTAGGCTACGCCCTGATGGAAAACAGTGACCTCGCCCAGTCACTAATTAAAAAAGCCTTACGGGCCCGGCAAGCCCGGGAAGCAGCCCGTAAGGCCCGCAACCAGTCCCGGTCTGGCAAGCGTAAGGGACGCAAGGAGCGTAACTTGTCCGGCAAGTTAACCCCCGCCCAATCTAAAAACAGCGCCAAAAACGAGCTGTTCTTAGTCGAAGGGGATTCGGCCGGTGGGAGTGCCAAGCAGGGGCGGGACCGCAAGTTCCAAGCCATCCTACCACTGCGCGGGAAGGTCTTAAACACCGAAAAGGCCAAGCTCGATGACGTGATGAAAAACGAGGAGCTTAACACGATCATTTACACGGTCGGGGCCGGGGTTGGAACCGAATTTAAGGTTGAAGACGCTAATTACGACAAGATCATCATTATGACCGATGCCGACGACGACGGCGCCCACATCCAAATCCTCTTATTGACCTTCTTTTACAAGTACATGCGGCCAATGATTGAAGCAGGGCGGGTCTACATTGCCATGCCACCTCTGTACCGCCTACAAAAAGGGCGCGGTAAAAACACCAAGATCACCTACGCTTGGACCAATGATGAACTGACTAAGTTGACCAAAAAGGGCAGCAAGGGGACGTCTTTGCAGCGCTTTAAGGGGCTGGGGGAAATGAACGCCGACCAATTATGGGAGACGACGATGAACCCGGAAACCAGGACCCTGATTCGGGTGCGGATTGAAGACGCCGAATTAGCCGAAAAGCGAATTACCACTCTAATGGGTAACAAGGTTGAACCGCGGCGGGAGTGGATCGATCAAAATGTCCACTTCACCATTAGCGACGACCAAGAAGCGGATGCCTTAGTGGAAGCTAAGGGCCAAGTGAGCCCCACGGTGACGACTTGGAACGAGTAA

Protein sequence:

MAQEEYKYDASSIKILKGLEAVRKRPGMYIGSTDAHGLHHLVYEIVDNAVDEALSGFGDEINVTIEPDNAITVQDHGRGMPVGMHESGKPTPEVIMTILHAGGKFGQADGYKSSGGLHGVGASVVNALSSKLTLTIVRDHVRYQEKFRDGGQPIGTLKELGKTREGSGTTVTFKPDPTIFSTTVYDYQTLARRLRESAFLLKGVKITLTDKREGMEQEEVFQFENGIEDFVAYLNEDKDTLGKVFSFTGTQDGVEVDVAAQYNDGYTENLLSFVNNVRTPGGGTHEVGFRGAWTKTFNDYARKVGLLKERDKNLEGTDVREGLTAVVSVRIPERILQFEGQTKGKLGTPEARKIVDTIVSEQLGYALMENSDLAQSLIKKALRARQAREAARKARNQSRSGKRKGRKERNLSGKLTPAQSKNSAKNELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKLDDVMKNEELNTIIYTVGAGVGTEFKVEDANYDKIIIMTDADDDGAHIQILLLTFFYKYMRPMIEAGRVYIAMPPLYRLQKGRGKNTKITYAWTNDELTKLTKKGSKGTSLQRFKGLGEMNADQLWETTMNPETRTLIRVRIEDAELAEKRITTLMGNKVEPRREWIDQNVHFTISDDQEADALVEAKGQVSPTVTTWNE

GenBank Info

gene - parE
locus_tag - FAM19471-i1-1.1_001034
EC_number - 5.6.2.2
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003683141.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DNA topoisomerase IV subunit B
protein_id - extdb:FAM19471-i1-1.1_001034

Gene Locus

Located on scaffold FAM19471-i1-1_scf17

Cellular location expand

Responsible annotations:
SL-0187: GO:0009295 nucleoid
FAM19471-i1-1.1_001033
FAM19471-i1-1.1_001035