OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_001038
locus tag:
FAM19471-i1-1.1_001038
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Product
type I DNA topoisomerase
Gene Code
topA
Ortholog
N0.HOG0001401 type I DNA topoisomerase
KEGG gene
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
Eggnog Protein
EP:topA
Eggnog Ortholog
EO:COG0550
Eggnog Description
ED:Releases the supercoiling and torsional tension of DNA
EC Number
EC:5.99.1.2 Transferred to 5.6.2.1
EC Number
EC:5.6.2.1 DNA topoisomerase; type I DNA topoisomerase; untwisting enzyme; relaxing enzyme; nicking-closing enzyme; swivelase; omega-protein; deoxyribonucleate topoisomerase; topoisomerase
Sequences
Nucleotide sequence (GC-content: 54.3 %):
A T G A G T T T G G C A A C T A A A C A A G A A A G C A C A A C A A A G A A A A A A A C C A C C C G G C G C A A A G T T A G C C G G A C T A A C C A A A A G A A G C T G G T C A T C G T T G A A T C G C C T T C C A A G G C C A A G A C G A T T G G T A A G T A C C T C G G A C G G A C T T A C A A G G T C G T C G C A A G C C T C G G C C A T G T C C G C G A C C T C C C C A A G T C G C G G A T G G G G G T C G A T A T C G A C C A C G A T T A C C A A C C C G A T T A C A T T T C G A T C C G G G G T A A G G G G G A C G T G A T T A A G G A A T T G C G C A A G G A C G C C A A G G C G G C C A A G G C C G T C T A C C T G G C T T C C G A C C C G G A C C G G G A A G G G G A A G C C A T C G C T T G G C A C G T G G C G A A C C T C T T G A A G A T G G A C C C G A C C G A A A A G A A C C G G G T C A C C T T C C A C G A A A T C A C C A A G G A T G C C G T T A A A G A G G C C T T T A A A G A A C C T C G C A C G A T T A A C A T G G A C C T A G T G G A C G C T C A G C A G G C C C G C C G G G T G C T C G A C C G C T T A G T G G G G T A C T C G A T T T C G C C A A T C C T C T G G A A A A A G G T T A A A A A G G G C C T G T C G G C G G G G C G G G T G C A A T C C G T C G C C T T G A A C C T C A T C A T C C A G C G C G A A A A C G A G A T T C G G A A T T T C G T T C C C G A A G A A T A C T G G A C G A T T G A C G C C G A C T T C A A A A A G G G C C G A G A A A A G T T C C A A G C G A G C T T C T A C G G C C A A A A C G G T A A G A A G G C C A A C C T G A A G A A C C A A G A A G C C G T C C A A G C G G T T C T A C A A C A A C T C G A C C G C C A G C A G G A C T T T T C A A T T A C C A A A G T T G A C C G G C G G G A A C G G C G C C G G A T G C C G C A A C C A C C G T T T A C C A C C T C G A C A A T G C A A C A G G A T G C C A A C C G C C G T T T A A A C T T C C G G A C C C G T A A A A C G A T G A T G G C C G C C C A A C A A C T G T A C G A A G G G A T T A A C A T C G G C C A G G G C G C C G C C G T T G G G C T A A T T A C C T A C A T G C G G A C C G A C T C C A C C C G G A T T G C T G G G G T G G C T A A G C A C G A G G C T T C C A C T T T C A T C C A C G A A C A C T A C G G G G C G G A A T A C G C C G C C A C C A A G C C G G T C A A G G G G A A G C T A C A A G A A G G G G C C C A A G A T G C C C A C G A A G C A A T T C G G C C G A C C T C A G T T A A C C G G A C C C C G G C C G A G A T G A A G G A G T T T T T G A C C C C T G A C C A A T A C A A A C T C T A C A A C C T G A T C T G G T C G C G C T T T G T C G C C A G T C A G A T G A C C C C G C A A G T G A C G G A C A C G A T G G C C G T C A C C A T C A C C C A A A A T G G G G T C G A C T T C C G T G C C A A C G G G T C G A A G G T T A A G T T T G A T G G T T T T A C T A A G G T C T A C A A G G G G A G C C A G G G T A A G G A T A A T A T C T T A C C T A A C C T A G A A G A G G G C G A C G C C G T C A A G A T G G T C G C C G A C A A T C C G G C C C A A C A T T T C A C C C A G C C A C C G G C T C G C T T C A C C G A A G C C G C C C T G G T T A A G A C G C T G G A A G A A A A C G G G G T T G G G C G C C C G T C C A C C T A C G C G C C A A C C T T A G A T A C G A T C C A A C G C C G C T A C T A C G T C A A G C T A G A A T C T C G T C A C T T T G A A C C A A C T G A A C T T G G G G A A A T C G T T A A C G A T T T G A T T A C C A A G C A T T T C C C G G A C A T C G T C A A C G T C A A G T T T A C C G C C G A G G T G G A A G A C T C A C T T G A T A A G A T C G A A G A G G G C A A G G A G A A C T G G G T G C A A G T C G T T G A T G G C T T C T A C A A G C C G T T C T C A A A G G A A G T G G C C A C G G C C G A A G A G C A G G T G G C T A A G A T T G A G A T G A A G G A T G A A C T A G C C G G G T C C A A T T G C G A G A T T T G T G G T G C C C C G A T G G T C A T T A A G A T G G G G A A G T A C G G T A A G T T T T A C G C T T G T T C C C G C T T T C C G A A C T G C C G T A A C A C C A A G G C G A T C G T T A A A G A C A C C G G G G T C G A A T G C C C A C T T T G C C A C C A G G G A A C G G T G G T G G A A C G T A A G T C C A A G A A G A A C C G G G T C T T T T A C G G T T G T T C T C G G T A C C C G G A C T G T G A C T T C C T G T C T T G G G A C C G G C C A A T T G G T C G C G A C T G C C C A A A G G A T G G G C A C T T C T T G G T T G A A A A A A A G G T C A A G G G G G G C A A G C A A G T C C T C T G T C C A A A C G G G G A T T A T A A G G A A G A A G T T C A A A A A T A A
Protein sequence:
M S L A T K Q E S T T K K K T T R R K V S R T N Q K K L V I V E S P S K A K T I G K Y L G R T Y K V V A S L G H V R D L P K S R M G V D I D H D Y Q P D Y I S I R G K G D V I K E L R K D A K A A K A V Y L A S D P D R E G E A I A W H V A N L L K M D P T E K N R V T F H E I T K D A V K E A F K E P R T I N M D L V D A Q Q A R R V L D R L V G Y S I S P I L W K K V K K G L S A G R V Q S V A L N L I I Q R E N E I R N F V P E E Y W T I D A D F K K G R E K F Q A S F Y G Q N G K K A N L K N Q E A V Q A V L Q Q L D R Q Q D F S I T K V D R R E R R R M P Q P P F T T S T M Q Q D A N R R L N F R T R K T M M A A Q Q L Y E G I N I G Q G A A V G L I T Y M R T D S T R I A G V A K H E A S T F I H E H Y G A E Y A A T K P V K G K L Q E G A Q D A H E A I R P T S V N R T P A E M K E F L T P D Q Y K L Y N L I W S R F V A S Q M T P Q V T D T M A V T I T Q N G V D F R A N G S K V K F D G F T K V Y K G S Q G K D N I L P N L E E G D A V K M V A D N P A Q H F T Q P P A R F T E A A L V K T L E E N G V G R P S T Y A P T L D T I Q R R Y Y V K L E S R H F E P T E L G E I V N D L I T K H F P D I V N V K F T A E V E D S L D K I E E G K E N W V Q V V D G F Y K P F S K E V A T A E E Q V A K I E M K D E L A G S N C E I C G A P M V I K M G K Y G K F Y A C S R F P N C R N T K A I V K D T G V E C P L C H Q G T V V E R K S K K N R V F Y G C S R Y P D C D F L S W D R P I G R D C P K D G H F L V E K K V K G G K Q V L C P N G D Y K E E V Q K
GenBank Info
gene - topA
Gene Locus
Located on scaffold FAM19471-i1-1_scf17
FAM19471-i1-1.1_001037
