update range to 10000 bp
locus tag: FAM19471-i1-1.1_001041 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 ylqF
Gene Product
 ribosome biogenesis GTPase YlqF
Ortholog
 N0.HOG0003442 ribosome biogenesis GTPase YlqF
KEGG gene
 K14540 rbgA; ribosome biogenesis GTPase A
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0042254 ribosome biogenesis
Gene Ontology
 GO:0022613 ribonucleoprotein complex biogenesis
Gene Ontology
 GO:0017111 ribonucleoside triphosphate phosphatase activity
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0003924 GTPase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:rbgA
Eggnog Ortholog
 EO:COG1161
Eggnog Description
 ED:Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity

Sequences

Nucleotide sequence (GC-content: 56.5 %):

ATGGCAACTATTCAATGGTTCCCCGGCCATATGGCCAAGGCCCTGCGCCAAATTAAAGAACAAATGCCCTTAGTCGACATCGTCTTTGAACTGGTCGACGCCCGCGTTCCGTATTCAACGCAAAACCCGGAGATTGACCGGATGGCCGGCGACAAACCCCGCCTGTTAATCATGACCAAAACCGACCTGGCCGACCCGACGACAACGGCCCACTGGATCGACTACTTTGAACAAAACGGTCAACCGGTCTTGGCGCTCGATTCCAGGGCCCACCAGGTTGCTAAACAGGTGACCGTAAAGGCCCAACAGATTCTAAAGGACCAGTTGGCCGCCGAGCGAGCAAAGGGGATGCAAAAGCGGGCGATCCGGGCGATGTGCGTCGGGGTTCCCAACGTTGGTAAGTCCACCTTGCTCAACCACTTGGTGAAAAAAAACGTTGCCGCGACCGGGAACCGGCCAGGGGTGACGACCGGCCAACAATGGCTACGTTCCTCGGCCGACTTGGAACTGTTAGACACCCCCGGGGTCTTATGGCCTAAGTTTGCCACCCAAACCCAGGCCAAGATGTTGGCCCTGTCCGGGGCGATCAAGGACTCGCTGTACCCTAAAGACGACGTGGCGATCTTTGCCCTGGATTACTTACGGGCCCACCGTACCCAAGAGCTCATGACCCGCTACCGGTTGAGCCCGGCTAGTCTTGAAGACGGTGTGACCACCCCAGACCTGTTGTTAGAAATCACCAAGAAAATGGGGATGAAAGACGATTACGACCGGGCCAGCGAGCGGCTGATTTTTGAAATGCGGCGGGGTAAATTGGGGACCTTTACCCTTGAAGACCCCACCGATTTGGAAGCGGGGGACGAAGATGAGTAA

Protein sequence:

MATIQWFPGHMAKALRQIKEQMPLVDIVFELVDARVPYSTQNPEIDRMAGDKPRLLIMTKTDLADPTTTAHWIDYFEQNGQPVLALDSRAHQVAKQVTVKAQQILKDQLAAERAKGMQKRAIRAMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSADLELLDTPGVLWPKFATQTQAKMLALSGAIKDSLYPKDDVAIFALDYLRAHRTQELMTRYRLSPASLEDGVTTPDLLLEITKKMGMKDDYDRASERLIFEMRRGKLGTFTLEDPTDLEAGDEDE

GenBank Info

gene - ylqF
locus_tag - FAM19471-i1-1.1_001041
inference - COORDINATES: similar to AA sequence:RefSeq:WP_007123239.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ribosome biogenesis GTPase YlqF
protein_id - extdb:FAM19471-i1-1.1_001041

Gene Locus

Located on scaffold FAM19471-i1-1_scf17

FAM19471-i1-1.1_001040
FAM19471-i1-1.1_001042