update range to 10000 bp
locus tag: FAM19471-i1-1.1_001047 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R06941 (S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase; (3S)-3-Hydroxyadipyl-CoA + NAD+ <=> 3-Oxoadipyl-CoA + NADH + H+ kornec00360kornec00930kornec01100kornec01120
KEGG reaction
 R05576 (S)-3-Hydroxybutanoyl-CoA:NADP+ oxidoreductase; 3-Hydroxybutanoyl-CoA + NADP+ <=> Acetoacetyl-CoA + NADPH + H+
KEGG reaction
 R01976 (S)-3-Hydroxybutanoyl-CoA:NADP+ oxidoreductase; (S)-3-Hydroxybutanoyl-CoA + NADP+ <=> Acetoacetyl-CoA + NADPH + H+ kornec00362kornec00650kornec01100kornec01120kornec01200
Ortholog
 N0.HOG0003757 3-hydroxyacyl-CoA dehydrogenase family protein
KEGG gene
 K00074 paaH, hbd, fadB, mmgB; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] kornec00360kornec00362kornec00650kornec01100kornec01120kornec01200
Eggnog Ortholog
 EO:COG1250
Eggnog Description
 ED:3-hydroxyacyl-CoA dehydrogenase
EC Number
 EC:1.1.1.35 3-hydroxyacyl-CoA dehydrogenase; beta-hydroxyacyl dehydrogenase; beta-keto-reductase; 3-keto reductase; 3-hydroxyacyl coenzyme A dehydrogenase; beta-hydroxyacyl-coenzyme A synthetase; beta-hydroxyacylcoenzyme A dehydrogenase; beta-hydroxybutyrylcoenzyme A dehydrogenase; 3-hydroxyacetyl-coenzyme A dehydrogenase; L-3-hydroxyacyl coenzyme A dehydrogenase; L-3-hydroxyacyl CoA dehydrogenase; beta-hydroxyacyl CoA dehydrogenase; 3beta-hydroxyacyl coenzyme A dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase; beta-ketoacyl-CoA reductase; beta-hydroxy acid dehydrogenase; 3-L-hydroxyacyl-CoA dehydrogenase; 3-hydroxyisobutyryl-CoA dehydrogenase; 1-specific DPN-linked beta-hydroxybutyric dehydrogenase kornec00062kornec00071kornec00280kornec00281kornec00310kornec00362kornec00380kornec00623kornec00650kornec00720kornec00930kornec01100kornec01110kornec01120
EC Number
 EC:1.1.1.157 3-hydroxybutyryl-CoA dehydrogenase; beta-hydroxybutyryl coenzyme A dehydrogenase; L(+)-3-hydroxybutyryl-CoA dehydrogenase; BHBD; dehydrogenase, L-3-hydroxybutyryl coenzyme A (nicotinamide adenine dinucleotide phosphate); L-(+)-3-hydroxybutyryl-CoA dehydrogenase; beta-hydroxybutyryl-CoA dehydrogenase kornec00360kornec00362kornec00650kornec01100kornec01120
Gene Product
 3-hydroxyacyl-CoA dehydrogenase

Occurs in the following pathway maps:

Pathway Description
kornec00062 Fatty acid elongation
kornec00071 Fatty acid degradation
kornec00280 Valine, leucine and isoleucine degradation
kornec00281 Geraniol degradation
kornec00310 Lysine degradation
kornec00360 Phenylalanine metabolism
kornec00362 Benzoate degradation
kornec00380 Tryptophan metabolism
kornec00623 Toluene degradation
kornec00650 Butanoate metabolism
kornec00720 Carbon fixation pathways in prokaryotes
kornec00930 Caprolactam degradation
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01200 Carbon metabolism

Sequences

Nucleotide sequence (GC-content: 54.7 %):

ATGACCATCAAAAATGTAACCATCGCCGGGGCCGGCACCTTAGGGAGCCAAATTGCCTACCAATCCGCCCTCAAGGGAATGCGGGTCACCGTTTGGAACCGCCACGTTGAGAGCGCCAAAACTCGTTTGCACGCCTTAAAGGATGCTTACCACCGTGACCTCAAGCTTTCCGAGGCCGATTTTAATGCCGGCCTGGCCAACATTGTCGCGGTCACGACCGACCTAAGAGAAGCCGTTGAAGACGCCGATTTAGTCATCGAAGCGGTGCCGGAAGCCATGGAAGTCAAGGAAGCCTTCTACGAGGAACTCAAGGCCGTAGTCCCTGATAAGACGATCGTGGCCAGCAACTCTTCGACCTTCATGCCTAGTCAATTGGTGAAGTTCTTTGGTGACCCGCGCCGCTTCTTGCACATCCACTTTGCTAACGAAATTTGGAAGTACAACGTCGCCGAAATCGTCGGTAACCCGGACACCAAGCCGGAACTGGTGGAGGAGGTAATTGACTTTGCTAAGGCCATCGGAATGGTGCCGATCCACCTTTACAAAGAGCAACCCGGCTACGTGCTCAACTCACTTCTGATTCCGTTTCTCGATGCCGCAATGGCGTTGTGGGTCAACGGCATCGCTAGCCCCCACGAAATTGATAAGGACTGGATGATTTCCACCGGCTCCCCGTCCGGCCCGTTCATTATCTTGGACACGGTGGGCTTACGGACCGCTTACCAAATCTCTTTAAACAAGCACCAAGCCACCGGTGATGAAATGGCCAAGCAAGTCGCCGACAAGCTCAAGGAAATGATCGATGCTGGCCACTACGGCAGGGAGGCCGGCCAGGGCTTTTACCACTACCCGGACGCCGAGTTTCTCGCCCCGGGCTTTTTGAAGTAG

Protein sequence:

MTIKNVTIAGAGTLGSQIAYQSALKGMRVTVWNRHVESAKTRLHALKDAYHRDLKLSEADFNAGLANIVAVTTDLREAVEDADLVIEAVPEAMEVKEAFYEELKAVVPDKTIVASNSSTFMPSQLVKFFGDPRRFLHIHFANEIWKYNVAEIVGNPDTKPELVEEVIDFAKAIGMVPIHLYKEQPGYVLNSLLIPFLDAAMALWVNGIASPHEIDKDWMISTGSPSGPFIILDTVGLRTAYQISLNKHQATGDEMAKQVADKLKEMIDAGHYGREAGQGFYHYPDAEFLAPGFLK

GenBank Info

locus_tag - FAM19471-i1-1.1_001047
EC_number - 1.1.1.35
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014562426.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 3-hydroxyacyl-CoA dehydrogenase
protein_id - extdb:FAM19471-i1-1.1_001047

Gene Locus

Located on scaffold FAM19471-i1-1_scf18

FAM19471-i1-1.1_001046
FAM19471-i1-1.1_001048