locus tag:
FAM19471-i1-1.1_001059
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
KEGG reaction
|
R02164 |
succinate:quinone oxidoreductase; Quinone + Succinate <=> Hydroquinone + Fumarate |
kornec00020kornec00620kornec00650kornec00720kornec01100kornec01110kornec01120kornec01200 |
|
Ortholog
|
N0.HOG0001522 |
flavocytochrome c |
|
|
KEGG gene
|
K00244 |
frdA; fumarate reductase flavoprotein subunit [EC:1.3.5.4] |
kornec00020kornec00190kornec00620kornec00650kornec00720kornec01100kornec01110kornec01120kornec01200kornec02020 |
|
Gene Product
|
FAD-dependent oxidoreductase |
|
|
|
Eggnog Ortholog
|
EO:COG1053 |
|
|
|
Eggnog Description
|
ED:FAD binding domain |
|
|
|
EC Number
|
EC:1.3.5.4 |
Transferred to 1.3.5.1 |
kornec00020kornec00620kornec00650kornec00720kornec01100kornec01110kornec01120 |
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec00020
|
Citrate cycle (TCA cycle) |
|
kornec00190
|
Oxidative phosphorylation |
|
kornec00620
|
Pyruvate metabolism |
|
kornec00650
|
Butanoate metabolism |
|
kornec00720
|
Carbon fixation pathways in prokaryotes |
|
kornec01100
|
Metabolic pathways |
|
kornec01110
|
Biosynthesis of secondary metabolites |
|
kornec01120
|
Microbial metabolism in diverse environments |
|
kornec01200
|
Carbon metabolism |
|
kornec02020
|
Two-component system |
Sequences
Nucleotide sequence (GC-content: 57.8 %):
ATGAAAGCAGGAACGTACAAAGTAAAAGCTAAGGGGCACGGCTCATCCTTCATGCCAATGGAGGTCACGCTAAGCGACGATGCGATTCAACGGATTCGAGTTGACGCCAGTGGGGAAACAAGCGGGATCGCCGACGAAGTTTTTAAACGGCTTCCGGCTAAGATTGTGAAGGGACAAACGCTAAACGTGGACACCGTTGCCGGGGCGACAATCTCCTCACGTGGGGTCGTTGACGGGGTGGCCGAAGCGATTACCCTGGCCGGTGGCGATGCCGCTGAGTGGAAGCAACGGGCCAAGCCAGAAGCAGCGACTCAGGCCGCTCAAGTTGAGGAATATCAAACCGACGTGGTGGTAGTTGGGGCCGGTGGGGCTGGCTTGGCGGCCGCTACCCGGAGCCTCCAGCACGATAAGCAAGTTGTTATTTTAGAAAAGTTCCCGCAACTAGGGGGCAACACCACCCGGGCCGGGGGACCAATGAACGCCGCTGATCCGGACTGGCAAAGGGACTTTGCCGCCTTGACCGGGGAAAAAGAGACCCTGAAAGAGTTGGCTAACACGCCATTAGAACAGATCGACCCCGAATACCGTGCCGACTTTGAACGGTTACGGGAGCAAATTAAGGAATACATTGCTTCCGGAGCCCAGTACCTCTTTGATTCCAACCTCCTTCACGAAATCCAGACTTACTTAGGGGGGAAGCGTGAAGACCTCGCCGGTCATGAAATTCACGGTCGGTACCAGCTGGTCAAGACCTTGGTCGATAACGCTCTGGACTCGGTCAAATGGCTAGCTGACCTTGGGGTTAAATTCGATCAAACCGACGTAACAATGCCGGTTGGGGCCCTGTGGCGGCGTGGCCACAAGCCGGTTGAGCCAATGGGGTACGCCTTCATTCACGTCCTGGGCGACTGGGTTACGGAACACGGTGCCACCATCCTGACCGAAACCCGTGCCGAACACCTCCTGATGGAAAACGGCCGGGTAGTGGGGGTTGTGGCCCACAAGACCGACGGGACTAAGGTGACCGTCCGTGCTAAATCCACCTTCTTGACCGCCGGGGGCTTTGGCGCCAACACGCCAATGGTCCAAAAGTACAACACCTACTGGGAGCACATTGACGACGACATCGCCACCACTAATTCACCGGCCATCACCGGTGACGGGATTAGTTTAGGCCAGGAGGCAGGCGCCGAGTTGACCGGGATGGGCTTTATCCAGTTAATGCCAGTCTCCGACCCGGTGACCGGGGAACTGTTTACCGGCCTGCAGACGCCACCGGAAAACTTCATCATGGTCAACCAAGAGGGTAAGCGGTTCGTCAACGAGTTTGCGGAACGCGACACCCTGGCCGCCGCCGCGATTGCCCAGGGAGGCCTCTTCTACTTGATCGCCGATGATAAGATCAAAGAGACGGCCTACAACACGACCCAGGAATCAATTGACGCCCAAGTCGAAGCCGGCACCCTCTTTAAGGCGGATGCGTTAGCGGAACTAGCCGGGAAGGTGGGGATGGACCCGGCCACCCTGGAAGACACGATTAACAAGTACAATTCTTACGTCGACGCGGGCCACGATCCGGAGTTTGGCAAGAGTGCCTTCCACCTTAAGTGCGAAGTGGCGCCATTTTACGCCACCCCGCGCAAGCCGGCCATCCACCACACGATGGGGGGCTTGGCGATTGATGAACACGGTCACGTGCTAGACAAGGCGGAGCGAGTAATCGCCGGTTTATACTCCGCCGGGGAAAACGCCGGGGGCCTCCACGCTGGGAACCGGCTCGGTGGTAACTCGTTGGCTGATATCTTTACCTTTGGCCGCTTGGCCGCCGATACCGCCGCACAAGAAAACGGCTAG
Protein sequence:
MKAGTYKVKAKGHGSSFMPMEVTLSDDAIQRIRVDASGETSGIADEVFKRLPAKIVKGQTLNVDTVAGATISSRGVVDGVAEAITLAGGDAAEWKQRAKPEAATQAAQVEEYQTDVVVVGAGGAGLAAATRSLQHDKQVVILEKFPQLGGNTTRAGGPMNAADPDWQRDFAALTGEKETLKELANTPLEQIDPEYRADFERLREQIKEYIASGAQYLFDSNLLHEIQTYLGGKREDLAGHEIHGRYQLVKTLVDNALDSVKWLADLGVKFDQTDVTMPVGALWRRGHKPVEPMGYAFIHVLGDWVTEHGATILTETRAEHLLMENGRVVGVVAHKTDGTKVTVRAKSTFLTAGGFGANTPMVQKYNTYWEHIDDDIATTNSPAITGDGISLGQEAGAELTGMGFIQLMPVSDPVTGELFTGLQTPPENFIMVNQEGKRFVNEFAERDTLAAAAIAQGGLFYLIADDKIKETAYNTTQESIDAQVEAGTLFKADALAELAGKVGMDPATLEDTINKYNSYVDAGHDPEFGKSAFHLKCEVAPFYATPRKPAIHHTMGGLAIDEHGHVLDKAERVIAGLYSAGENAGGLHAGNRLGGNSLADIFTFGRLAADTAAQENG
GenBank Info
locus_tag - FAM19471-i1-1.1_001059
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639036.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - FAD-dependent oxidoreductase
protein_id - extdb:FAM19471-i1-1.1_001059
Gene Locus
Located on scaffold FAM19471-i1-1_scf18
FAM19471-i1-1.1_001058
