update range to 10000 bp
locus tag: FAM19471-i1-1.1_001078 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 tnpA
Ortholog
 N0.HOG0003278 IS200/IS605 family transposase, partial
KEGG gene
 K07491 rayT; REP-associated tyrosine transposase
Gene Product
 IS200/IS605 family transposase
Eggnog Ortholog
 EO:COG1943
Eggnog Description
 ED:Transposase IS200 like

Sequences

Nucleotide sequence (GC-content: 41.9 %):

ATGTCGAAGGACAAAATCGAAGATGCCATTTATACACGGCGTTATATTTATAACTTTCACTACCATTTGATTTGGGTAACCAAGTATCGTAATCCAACTTTTACTAGTGAAGCGTTAGTGAATGAAATGAAAGAAATCCTTACAACGGTTGCGGCAGATAACGAAATCGTGATTGAGCACATGGAAGTAATGCCTGACCACGTCCATGTGTTGATTAGTTTTCCACCTAGTAAAGCACCAACTAGCGCTATCAAAGCCCTCAAAGGACGCAGTGCCTTCATTTTCCTCAAGCGACACCCGGAAATCCGCCAGTCGCAGTATTGGGGTGGCCACCTCTGGTCCCCTAGCTATTACATGAGTACTTTAGGGAATATGAGCAAGGAGGTCGTTGAGCAATATATCAATAATCAAAAGTACAATGAAATAAAAAAACGCCCTAAAGGACGTAAGTAG

Protein sequence:

MSKDKIEDAIYTRRYIYNFHYHLIWVTKYRNPTFTSEALVNEMKEILTTVAADNEIVIEHMEVMPDHVHVLISFPPSKAPTSAIKALKGRSAFIFLKRHPEIRQSQYWGGHLWSPSYYMSTLGNMSKEVVEQYINNQKYNEIKKRPKGRK

GenBank Info

gene - tnpA
locus_tag - FAM19471-i1-1.1_001078
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003684311.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS200/IS605 family transposase
protein_id - extdb:FAM19471-i1-1.1_001078

Gene Locus

Located on scaffold FAM19471-i1-1_scf19

FAM19471-i1-1.1_001077
FAM19471-i1-1.1_001079