OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_001094
locus tag:
FAM19471-i1-1.1_001094
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Code
tnpB
Ortholog
N0.HOG0002859
transposase, partial
KEGG gene
K07496
K07496; putative transposase
Gene Product
IS200/IS605 family element transposase accessory protein TnpB
Eggnog Ortholog
EO:COG0675
Eggnog Description
ED:transposase
Sequences
Nucleotide sequence (GC-content: 39.0 %):
A T G G T T C T T A A A G C C G T G A A A A T G C G T A T A T A T C C T A A T T C C G A G C A A C G T G A C C G T T T A A T G C A A A C C T T C G G T T G C G C T C G T T T T G T G T G G A A T C A G A T G C T T A A T A T G C A A A T T G A G C G G C G A A A G A A C A A T C C A G A C G C C A A G T T T G T C A A T G C C T T T G G C A T G A A C A A T C T T C T A A A A C G A T T A A A A G A A G A A T A T C C C T G G T T G A A G C A A G C A G A A T C A A C A T C C T T G C A A A G C A C T A A T C G C A A T C T A G C C G A C G C C T T T C A G C G T T T T T T T A A A G G G C A A A A T A A A T T T C C A C A C T T T A A G T C A C G A A A G T A T G C A C A G A G C T A T A A C T C G A A A T G T G T T A A C C A C A A C A T T A A A G T G A T T G A T A A T C A C C A T A T T A A G T T G C C T A A A T T A G G G G T A G T T T A C T T T C G A T C A G G A C G T T T A C C A C A A G G C A A A A T C A A G A A C G T T A C T G T T C G C C T A A C T G T T G C T A A T C A A T A C T A C A T T A C C G T T T T A A C T G A A T G C G A A A A C C A A A C A T T A G C T A A G A C T G G T A A G C G C G T T G G T G G T G A T T T A G G A T T A A A A T C A T T A C T T A A T C T A T C C G A C G G T T A C A A A G A G C C A A T T C A C C A T T T T G A A G A T A A G T A T C G T A A G A A G C T A C A C C A T T G G G A A A A G T T G C G C A G T C G A C G C T A C T T A T T A G C T A A A C A A G C C A T T G C T T G G G A T T A T C A C A A T A A G G T C T T A G C T C C A C G G C A A T T A G A C G A C T T C A A A A A T T A C C A A A A A G C T C G T G T C A T G G T T G C T A A A T A T C G T C A A A A A A T C G C C A A C C A A C G G T T G G A T C A G T T A C A A A A G T T C A C A A C C A A G T T A G T T A A A C A A T A T G G C A T C A T T G T G C T A G A G A A A C T T A A G A T T A A G G G T A T G T T G A A A A A T C A T A A A C T A G C T C G A G C G A T T A C C A A C G C T A G T T G G T C T A A G C T A G T T A G T A T C T T G C A G T A T A A A T G T G A T T G G T A C G G T A A A A A A C T C A T T C A G G T T A A T C C A G C A T A T A C T A G T C A A A T C T G T A T T A A C T G T G G G A A A A A C A A C C A T C G G T T A G G T T T A G A T A A A T C G G A A T G G C T A G A C G T T C G T G A A T G G G A T T G T C C C A A C T G C G G G A C C C G C C T A G A T C G C G A T A T C A A T G C A G C T C A A G T A A T T C T G A A A A A G G G G T T A G C T A C C C A A T A A
Protein sequence:
M V L K A V K M R I Y P N S E Q R D R L M Q T F G C A R F V W N Q M L N M Q I E R R K N N P D A K F V N A F G M N N L L K R L K E E Y P W L K Q A E S T S L Q S T N R N L A D A F Q R F F K G Q N K F P H F K S R K Y A Q S Y N S K C V N H N I K V I D N H H I K L P K L G V V Y F R S G R L P Q G K I K N V T V R L T V A N Q Y Y I T V L T E C E N Q T L A K T G K R V G G D L G L K S L L N L S D G Y K E P I H H F E D K Y R K K L H H W E K L R S R R Y L L A K Q A I A W D Y H N K V L A P R Q L D D F K N Y Q K A R V M V A K Y R Q K I A N Q R L D Q L Q K F T T K L V K Q Y G I I V L E K L K I K G M L K N H K L A R A I T N A S W S K L V S I L Q Y K C D W Y G K K L I Q V N P A Y T S Q I C I N C G K N N H R L G L D K S E W L D V R E W D C P N C G T R L D R D I N A A Q V I L K K G L A T Q
GenBank Info
gene - tnpB
locus_tag - FAM19471-i1-1.1_001094
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390817.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS200/IS605 family element transposase accessory protein TnpB
protein_id - extdb:FAM19471-i1-1.1_001094
Gene Locus
Located on scaffold FAM19471-i1-1_scf19