locus tag:
FAM19471-i1-1.1_001127
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0003337 |
LysM peptidoglycan-binding domain-containing protein |
|
|
Gene Product
|
LysM peptidoglycan-binding domain-containing protein |
|
|
|
Eggnog Protein
|
EP:lytE |
|
|
|
Eggnog Ortholog
|
EO:COG1388 |
|
|
|
Eggnog Description
|
ED:Lysin motif |
|
|
Sequences
Nucleotide sequence (GC-content: 50.9 %):
ATGTTAAAGAAGAACTTACTGAAGATTTCTGCAACCCTTGGTGCGGCCGCATTAGGGGTAGCCGCTACCGCTAGCGTTGCGAACGCCGACACGGTGTACACTGTTCAGTCAGGTGACACCCTGTCCGGCATCTCCCAAAAGTTCGCCAACAACAACAGCTTGGTTGATTCCTTAGCCAAGAACAACAACATCCAAAACATCAACTTGATCTACGTTGGTCAACAATTACTGATCAAGGACAACGGTGAAATCACCCAAGCTACGCAAGCACAAGCACAAACCTTGCCGTCTGCTAACACGACTAGCACCGCAAGTTCCCAAGCAAGCACGAACACGCAAGCACAAGCTACCACGCCGGCAACGTCTAGCTCCGATGACGCTGCAAAGGCTTGGATCGCCGCTCGCGAATCTGGTGGTTCCTACACCGCTCAAAATGGTAACTACTACGGTAAGTACCAACTTTCCCGTGCTTACTTAGGTGGGGATTACTCCGCTGCTAACCAAGAACGGGTTGCTAACCAATACGTTGCTTCCCGTTACGGTTCTTGGAGTGCCGCTAAGTCCTTCTGGCTTGCTAACGGTTGGTACTAA
Protein sequence:
MLKKNLLKISATLGAAALGVAATASVANADTVYTVQSGDTLSGISQKFANNNSLVDSLAKNNNIQNINLIYVGQQLLIKDNGEITQATQAQAQTLPSANTTSTASSQASTNTQAQATTPATSSSDDAAKAWIAARESGGSYTAQNGNYYGKYQLSRAYLGGDYSAANQERVANQYVASRYGSWSAAKSFWLANGWY
GenBank Info
locus_tag - FAM19471-i1-1.1_001127
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390887.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - LysM peptidoglycan-binding domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_001127
Gene Locus
Located on scaffold FAM19471-i1-1_scf20
FAM19471-i1-1.1_001126
